Populus nigra (Lombardy poplar): 133706333
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Entry
133706333 CDS
T10372
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03430
Mismatch repair
pnz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133706333
03460 Fanconi anemia pathway
133706333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133706333
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133706333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
133706333
NCBI-ProteinID:
XP_061987826
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Position
11:3733921..3746519
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AA seq
747 aa
AA seq
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MEAGEHSPPTSPETDLMEIKTEKTPYSPSEPPKIHRLDESVVNRIAAGEVIQRPVSAIKE
LVENSLDAHSTSINVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTNYEDLQSI
KSMGFRGEALASMTYVGHVTVTTITPGKLHGYRVSYRDGVMEDEPKPCAAVKGTQIMVEN
LFYNMIARRKTFQNSSDDYSKIVDLLSRFAIHHINVSFSCRKHGASRADVHSVTTSSRLD
SIRSVYGVSVALNLMKIEVPDSDPSSSVFNMDGLISNSNYVAKKTTMVLFINDRLVECTA
LKRAIEIVYAATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEFIINTIQSAVE
SKLRNSNEARTFQEQTLDSSPSVTLSAKKDSNVNPSPSPYGSKLQKVPVNKMVRTDASDP
AGRLHAYLQARPVDNLEGNSSLAAVRSSVRQRRNPKESADISSVQELVNDIDGNCHSGLL
DIVRNCTYIGMADDVFALLQYKTQLYLANVVNLSKELMYQQVLRRFAHFNVIQLSDPAPL
RLLIMLALKEEDLDLESNENEDLREKIAEMNTELLKDKAELLEEYFCIYIDSHGNLSRLP
VILDQYTPDMDRIPEFVLSLGNDVDWEDEKNCFQTIAAAVGNFYAMHPPLLPSPSGDGLQ
FYRRRKPEKNPDDKEKATDIDVETEDELEHELLSEAETAWAQREWSIQHVLFPSMRLFLK
PPTSMATNGTFVQVASLEKLYKIFERC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggtgaacactcacctccaacatcaccggaaaccgacctaatggaaataaaa
acagaaaaaacaccatactcaccatcagaaccaccaaaaatccaccgtctagatgagtcc
gtggtcaaccgaatcgccgccggagaagtaattcaacgccctgtttcagccatcaaagaa
ctagtagaaaacagcctcgacgcgcactctacctctataaacgtcgttgttaaagacggt
ggccttaaactcattcaagtctccgatgacggccacggcattcgccgtgaggatttgcca
atattatgcgagaggcatacgacgtcgaagctgactaattacgaggatttacagtcgatt
aagtcaatggggttcagaggagaggcattggccagcatgacttatgtaggtcatgtgact
gtcactactattactccgggaaaattgcatggttacagggtttcatatagagatggggta
atggaggatgagcctaagccttgtgctgcagttaaagggacgcagataatggtagaaaac
ttgttctataacatgattgctaggagaaagacattccagaattcttcagatgattattcc
aaaatagtggacttgctaagccgatttgcgattcatcatattaacgtgagcttttcttgc
agaaagcatggagcatccagagcagatgtccactcagtcaccacatcatcaaggcttgat
tccatcagatctgtttatggagtttctgttgctctcaatctaatgaaaatagaagttcca
gacagtgatccttcaagttcagtttttaatatggatggactcatttccaattcaaattat
gtggcgaagaaaacaacaatggttctttttatcaatgatagactagtggaatgcactgct
ttaaagagagctattgaaattgtttatgctgctaccttaccaaaagcttcaaaacctttc
atatacatgtcaatagtattgccacctgagcatgttgatgtgaatgtgcatccaacaaag
agagaggtaagccttctgaaccaggaattcattattaacacgatacaatctgctgttgaa
tcaaaattgaggaactcaaacgaggctaggacatttcaagaacagacgttggattcctct
ccaagtgttactttaagtgcaaaaaaggattcaaatgttaacccctcaccctcgccttat
gggtcaaaattgcaaaaagttccagtgaataaaatggtaagaactgatgcatcggatcct
gctggaaggctgcatgcctatttgcaagccaggcctgttgataatcttgaagggaattct
agcttggcagctgtgaggtcttcagttagacaaagaagaaaccctaaggaaagtgcagat
atttcgtctgttcaggagcttgttaatgatattgatggaaactgtcattcaggtctgctg
gatattgtcagaaactgcacatatattggaatggcagatgatgtttttgcattgcttcag
tataaaacgcagctgtatcttgcaaatgtagtgaacttaagcaaagagctcatgtatcag
caagttctacgacgatttgctcatttcaatgtcatacaactgagtgatccagcccctctt
agattgctcattatgttggcattgaaggaagaagacttggatctagaatccaatgaaaat
gaagacttgagagagaagattgcagaaatgaacactgaactgctaaaggataaggcagaa
ctgctagaggagtatttctgcatatacattgactcacatgggaatttgtctcggcttcct
gtcatacttgaccaatatacacctgacatggatcggattcctgaatttgtacttagtttg
ggaaatgatgttgattgggaggatgaaaagaattgctttcaaacaattgcagctgctgtt
gggaacttctatgccatgcatcctcctctattgcccagtccctcaggtgatggtttacaa
ttttacagaagaaggaaacctgaaaagaatcctgatgataaagaaaaagcaactgacata
gatgttgaaacggaggatgaacttgagcatgaattgctgtctgaggcagagactgcatgg
gcccagcgtgaatggtcaatacagcatgtattgtttccttccatgagactctttttaaag
ccaccaacttcaatggctacaaatgggacatttgttcaggtagcttcattggagaagctt
tacaagatatttgagagatgctaa
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