KEGG   Populus nigra (Lombardy poplar): 133706333
Entry
133706333         CDS       T10372                                 
Name
(RefSeq) DNA mismatch repair protein MLH1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03430  Mismatch repair
pnz03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    133706333
   03460 Fanconi anemia pathway
    133706333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133706333
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     133706333
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 133706333
NCBI-ProteinID: XP_061987826
LinkDB
Position
11:3733921..3746519
AA seq 747 aa
MEAGEHSPPTSPETDLMEIKTEKTPYSPSEPPKIHRLDESVVNRIAAGEVIQRPVSAIKE
LVENSLDAHSTSINVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTNYEDLQSI
KSMGFRGEALASMTYVGHVTVTTITPGKLHGYRVSYRDGVMEDEPKPCAAVKGTQIMVEN
LFYNMIARRKTFQNSSDDYSKIVDLLSRFAIHHINVSFSCRKHGASRADVHSVTTSSRLD
SIRSVYGVSVALNLMKIEVPDSDPSSSVFNMDGLISNSNYVAKKTTMVLFINDRLVECTA
LKRAIEIVYAATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEFIINTIQSAVE
SKLRNSNEARTFQEQTLDSSPSVTLSAKKDSNVNPSPSPYGSKLQKVPVNKMVRTDASDP
AGRLHAYLQARPVDNLEGNSSLAAVRSSVRQRRNPKESADISSVQELVNDIDGNCHSGLL
DIVRNCTYIGMADDVFALLQYKTQLYLANVVNLSKELMYQQVLRRFAHFNVIQLSDPAPL
RLLIMLALKEEDLDLESNENEDLREKIAEMNTELLKDKAELLEEYFCIYIDSHGNLSRLP
VILDQYTPDMDRIPEFVLSLGNDVDWEDEKNCFQTIAAAVGNFYAMHPPLLPSPSGDGLQ
FYRRRKPEKNPDDKEKATDIDVETEDELEHELLSEAETAWAQREWSIQHVLFPSMRLFLK
PPTSMATNGTFVQVASLEKLYKIFERC
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggaagccggtgaacactcacctccaacatcaccggaaaccgacctaatggaaataaaa
acagaaaaaacaccatactcaccatcagaaccaccaaaaatccaccgtctagatgagtcc
gtggtcaaccgaatcgccgccggagaagtaattcaacgccctgtttcagccatcaaagaa
ctagtagaaaacagcctcgacgcgcactctacctctataaacgtcgttgttaaagacggt
ggccttaaactcattcaagtctccgatgacggccacggcattcgccgtgaggatttgcca
atattatgcgagaggcatacgacgtcgaagctgactaattacgaggatttacagtcgatt
aagtcaatggggttcagaggagaggcattggccagcatgacttatgtaggtcatgtgact
gtcactactattactccgggaaaattgcatggttacagggtttcatatagagatggggta
atggaggatgagcctaagccttgtgctgcagttaaagggacgcagataatggtagaaaac
ttgttctataacatgattgctaggagaaagacattccagaattcttcagatgattattcc
aaaatagtggacttgctaagccgatttgcgattcatcatattaacgtgagcttttcttgc
agaaagcatggagcatccagagcagatgtccactcagtcaccacatcatcaaggcttgat
tccatcagatctgtttatggagtttctgttgctctcaatctaatgaaaatagaagttcca
gacagtgatccttcaagttcagtttttaatatggatggactcatttccaattcaaattat
gtggcgaagaaaacaacaatggttctttttatcaatgatagactagtggaatgcactgct
ttaaagagagctattgaaattgtttatgctgctaccttaccaaaagcttcaaaacctttc
atatacatgtcaatagtattgccacctgagcatgttgatgtgaatgtgcatccaacaaag
agagaggtaagccttctgaaccaggaattcattattaacacgatacaatctgctgttgaa
tcaaaattgaggaactcaaacgaggctaggacatttcaagaacagacgttggattcctct
ccaagtgttactttaagtgcaaaaaaggattcaaatgttaacccctcaccctcgccttat
gggtcaaaattgcaaaaagttccagtgaataaaatggtaagaactgatgcatcggatcct
gctggaaggctgcatgcctatttgcaagccaggcctgttgataatcttgaagggaattct
agcttggcagctgtgaggtcttcagttagacaaagaagaaaccctaaggaaagtgcagat
atttcgtctgttcaggagcttgttaatgatattgatggaaactgtcattcaggtctgctg
gatattgtcagaaactgcacatatattggaatggcagatgatgtttttgcattgcttcag
tataaaacgcagctgtatcttgcaaatgtagtgaacttaagcaaagagctcatgtatcag
caagttctacgacgatttgctcatttcaatgtcatacaactgagtgatccagcccctctt
agattgctcattatgttggcattgaaggaagaagacttggatctagaatccaatgaaaat
gaagacttgagagagaagattgcagaaatgaacactgaactgctaaaggataaggcagaa
ctgctagaggagtatttctgcatatacattgactcacatgggaatttgtctcggcttcct
gtcatacttgaccaatatacacctgacatggatcggattcctgaatttgtacttagtttg
ggaaatgatgttgattgggaggatgaaaagaattgctttcaaacaattgcagctgctgtt
gggaacttctatgccatgcatcctcctctattgcccagtccctcaggtgatggtttacaa
ttttacagaagaaggaaacctgaaaagaatcctgatgataaagaaaaagcaactgacata
gatgttgaaacggaggatgaacttgagcatgaattgctgtctgaggcagagactgcatgg
gcccagcgtgaatggtcaatacagcatgtattgtttccttccatgagactctttttaaag
ccaccaacttcaatggctacaaatgggacatttgttcaggtagcttcattggagaagctt
tacaagatatttgagagatgctaa

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