Polaribacter sp. ALD11: CW731_10485
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Entry
CW731_10485 CDS
T05264
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
poa
Polaribacter sp. ALD11
Pathway
poa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW731_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poa03019
]
CW731_10485
Enzymes [BR:
poa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CW731_10485
Messenger RNA biogenesis [BR:
poa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW731_10485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AUC85686
LinkDB
All DBs
Position
2378704..2380002
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AA seq
432 aa
AA seq
DB search
MTFKDLGLSPALVKAVEEKGYTKPSPIQEKAIPHILEGKDILASAQTGTGKTAGFTLPVL
QHLVETKHPKYRPLRALVLTPTRELAAQVHDNVREYSKYVDIKSAVVFGGVNAKPQIATL
RSGVDILVATPGRLLDLHDRKAVSFKRVDILILDEADRMLDMGFVRDINKIISFMPTKRQ
NLMFSATFSNDIKKLASGILRNPVSVETAPQNSTAKKVTHKVYKVDKNKKTEFTIKLIKD
NNWNQVLIFTRTKHGANKLTEKLIKSGISAAAIHGNKSQGARTKALKNFKDNSIKILVAT
DIAARGLDIPLLPHVVNFELPNVPEDYVHRIGRTGRAGAAGEAISLVCSEESEYQSEIEK
LLKEKLESTIVEGFEPTDTDAPKRAASQSKGSFGKKTKSQGNKPKSKPHFKGNKPSEPSG
RGRTSAPKKKRY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagatttaggtttatctccggcattggtaaaagcagttgaagagaaagga
tataccaaaccatcaccaatacaagaaaaggcaattccacatatattagaaggaaaagat
attttagcttcggcacaaactggtacaggaaaaactgccggttttacattgcctgtttta
caacatttagtagaaacaaaacacccaaaatacagacctttacgtgcattggttttaaca
ccaaccagagaattggctgcacaggttcatgacaacgttagagaatacagtaaatatgta
gacataaaatctgctgtagtttttggtggagtgaacgcaaaaccacaaattgcgactcta
agaagcggtgtggatattttggtagcaacccctggtagattattagacttacacgataga
aaagcagtttcttttaaaagggttgatattttaattcttgatgaagcagacagaatgcta
gacatgggttttgttagagatattaacaaaattattagttttatgcctacaaagcgtcag
aatttaatgttttctgcaacgttttctaatgatattaaaaaattagcttcaggaatttta
agaaatcctgtttctgttgaaacggctccgcaaaattcaacagcaaaaaaagtaactcac
aaagtttataaggttgataaaaacaaaaaaactgagtttacaataaaattaattaaagac
aataattggaaccaggttttaatctttacaagaacaaaacacggtgctaataaattgact
gaaaaattaataaaatctggaatttctgctgcagcaattcatggaaataaaagtcaaggt
gctagaacaaaagctttaaagaattttaaagacaattctattaaaattttggtagcaaca
gatattgctgcccgtggtttagacattcctttattacctcatgtagttaatttcgaattg
ccaaatgtgccagaagattatgtgcacagaattggtagaacaggaagagctggtgcagct
ggggaggcaatttctttggtttgtagtgaagaaagtgaataccaaagtgaaattgagaaa
ttactaaaagaaaaattagaatctactattgtagaaggttttgagcctacggatacagat
gctcctaaaagagctgcttcacaaagtaaaggttcttttggtaagaagactaaatctcaa
ggaaacaaaccaaaaagcaagcctcattttaaagggaacaaaccttctgagccttctgga
agaggaagaactagcgcacctaaaaagaagcgttattaa
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