Polaribacter sp. ALD11: CW731_14425
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Entry
CW731_14425 CDS
T05264
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
poa
Polaribacter sp. ALD11
Pathway
poa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW731_14425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poa03019
]
CW731_14425 (recQ)
03400 DNA repair and recombination proteins [BR:
poa03400
]
CW731_14425 (recQ)
Enzymes [BR:
poa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW731_14425 (recQ)
Messenger RNA biogenesis [BR:
poa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW731_14425 (recQ)
DNA repair and recombination proteins [BR:
poa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CW731_14425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HTH_40
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Agglutinin_C
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AUC86402
LinkDB
All DBs
Position
complement(3328437..3330548)
Genome browser
AA seq
703 aa
AA seq
DB search
MKKQTHTLLKNIFGYENFRPLQEEIINRTIDGKDSFVLMPTGGGKSMCFQIPALVFDGIT
LVVSPLISLMKDQVQALKSNGIKAAFFNSSISPQEENEVINSAINGDLQLLYLSPEKLIS
VRNTWLKALNIKLVAIDEAHCVSMWGHDFRPEYTQLKVFRNSLPNVPFMALTATADKSAR
KDIEQQLGLTNSKLFISSFDRKNLSIEVRGQVQKKKKLQEIVSFIKRRKNESGIIYCLSR
KNTEEVASYLKEDGHSVAFYHAGMNHEERERTQTDFINDDTKIIVATIAFGMGIDKSNVR
FVIHYNLPKNLEGYYQEIGRAGRDGLPSETMLYYNMRDFVLYSQFADNGANTGMQKEKLN
RMLQFAEAKSCRRKILLSYFGEHLTENCGNCDVCENPPKDFEGTILTQKALSGIVRMGEK
DGITMLINVLRGSNNADIHTKQYFTLKTYGIGKDISFFDWRDYVIQMANQGLIEIMYSEN
SALKITPIGWEVLKGEKTIRLTTPLTADDKKKEPKTVKTAIGSETNKDLFTALKKLRYSI
SKEEKMPAYIIFNDKTLKLMASELPVTENEFLAISGVGMNKMEKYGEEFMTVIRKFKGAS
KPKKTTTIQETFNLYKEGFNPTEIAEKRSLSITTIFSHLSQLYSEGKEVVLEKYVTKEVL
DKVRIAFNKLDRKIELKPIYEKLNEEVSYGEIRLSITLILKNE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaacaaacacacacccttttaaaaaatatttttggttacgaaaactttcgtccg
ttacaagaagaaatcatcaaccgaacaatagacggaaaagatagttttgtactgatgcca
actggtggtgggaaatcgatgtgtttccaaattcctgcattggtttttgatggaattaca
cttgtagtttctccgcttatttcattaatgaaagaccaagtacaagctttaaaatcaaac
ggaataaaagcagctttttttaacagctctatatctcctcaagaagaaaacgaagtaatt
aatagcgctattaatggcgacttacaattattgtatttatcgccagaaaaattgatatcg
gttcgtaacacttggttaaaagcactaaatataaaattagttgctattgacgaagcacat
tgtgtaagtatgtgggggcatgattttagacctgaatatacccaattaaaagtatttaga
aattcgcttccaaatgtgccttttatggcattaactgcaactgcagacaaatctgctaga
aaagatattgagcaacaattaggtttaacaaactcaaaattatttatttcttcttttgac
cgaaaaaacctaagcatagaagtacgagggcaagtccaaaaaaagaaaaagctacaagaa
attgtctcttttataaaacgaagaaaaaacgaaagcggtattatttattgtttgagtaga
aaaaacacagaagaagtagccagttatcttaaagaagatgggcattccgtagcattttat
cacgccggaatgaatcacgaagaaagagaaagaactcagaccgattttataaatgacgat
accaaaataattgttgccaccattgctttcggaatggggattgataaatcgaatgtgcgt
tttgtaattcattataacttacctaaaaacctcgaaggctattaccaagaaataggaaga
gcaggaagagatggattaccatcagaaaccatgttgtactacaatatgagagattttgtg
ctgtatagtcaatttgcagataatggtgccaatacagggatgcaaaaggagaagttaaac
agaatgcttcaatttgcagaagctaaatcttgtaggagaaaaatattattatcttatttt
ggagaacatcttacagagaactgtggcaattgtgatgtttgcgaaaatccgccaaaagat
tttgaaggcactattctaactcaaaaagcactttctggaattgtaagaatgggcgaaaaa
gatggaataacaatgcttataaatgtcttaagaggaagcaataacgcagacattcataca
aaacagtatttcactctaaaaacatatggaataggaaaggatatttcattcttcgactgg
cgagattatgtgattcaaatggcaaaccaaggattgattgaaataatgtatagcgaaaat
tctgctttaaaaataactccaatcggttgggaggttttaaaaggagaaaaaacaatacga
ttaacaactcctttaaccgctgacgataaaaagaaggaaccaaaaacagtaaaaacagca
attggaagcgagacaaataaagatttatttacagcgcttaaaaaattaagatactccatt
tcaaaggaagagaagatgccagcttacatcatttttaatgacaaaacattaaaattaatg
gcaagtgaacttcctgtaaccgaaaatgaatttctagcgatttccggagttggaatgaac
aaaatggaaaaatatggcgaagaattcatgactgttattcgcaaatttaaaggagcaagt
aaacctaaaaaaacaactacaatacaagaaacttttaacttgtataaagaaggatttaat
ccgacagaaattgcagaaaaaagaagtttatcaattaccactattttctcacatttatct
caattatactcggaaggaaaagaagtagtattagaaaaatatgttaccaaagaagttcta
gataaagtaagaattgcttttaataaattggatcgaaaaatcgaactgaaaccaatttac
gagaaactaaacgaagaagtttcttatggagaaataagactgagtattactcttatttta
aaaaatgaatag
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