Polaribacter vadi: LPB03_00915
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Entry
LPB03_00915 CDS
T04504
Name
(GenBank) DNA recombination protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pob
Polaribacter vadi
Pathway
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB03_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_00915
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB03_00915
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Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
AAA_27
DUF2813
SbcC_Walker_B
MukB
Roc
Motif
Other DBs
NCBI-ProteinID:
AOW16106
UniProt:
A0A1B8U120
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All DBs
Position
211926..213005
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AA seq
359 aa
AA seq
DB search
MYLQKISVVNFKNIASQSFDFQEKINCFVGDNGVGKTNVLDAIYYLSFTKSYFNAVAIQN
IKHGEGFFMIEGDYLLNDRNEKIVCSLKKGQKKVLKRNDKAYSKFSEHIGQFPLVIISPA
DRDLVTEGSDTRRKFIDGVISQQNKTYLQDLISYSKVLSQRNALLKYFAANRVFDALNLS
VYNEQLSEYGTRIYNVRKAFLEQFIPIFNEKYQIISGDKEQVNLNYKSQLHDFEMSDLLK
KSLEKDKILQYTTSGIHKDDLSFEIGEYPIKKFGSQGQQKSYLIALKLAQFEFIKQQSNV
LPILLLDDIFDKLDENRVSQIIDLVNNDEFGQIFITDTHADRTENILKQGSKEYQIFQL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacaaaaaatttcagtagttaattttaaaaatatagcctcacaatcgtttgat
ttccaagagaaaataaattgttttgtgggtgataatggtgttggaaaaaccaatgtttta
gatgccatttactacttgtcttttaccaaaagttactttaatgctgtcgcaattcagaat
ataaagcatggagaaggtttttttatgattgaaggagattaccttttaaatgatagaaat
gagaaaattgtgtgcagtttaaaaaaaggtcagaagaaagttttaaagagaaacgacaag
gcatatagcaagttctcagaacatattggtcagtttccattggtgataatttctcctgca
gatagagatttggttacagaaggtagtgataccagaagaaaatttattgatggtgtaatt
tctcagcagaacaaaacgtatttgcaagatttaatttcttacagtaaagtactttctcaa
agaaatgcgttgttaaaatattttgcagccaatcgcgtcttcgacgctttaaatttaagt
gtatataatgagcaactttctgaatatggaactcgaatttataatgttagaaaagctttt
ttagaacaatttattccgatttttaatgaaaaatatcaaataatttctggtgataaagag
caagtaaatttgaattataaaagtcaattacacgattttgaaatgtcggatttattaaaa
aaatcattagaaaaagataaaattctacaatacacaacttcaggtattcataaagacgat
ttaagtttcgaaattggcgaatatcctattaaaaagtttggttctcaaggacagcagaaa
tcgtatttaattgcattaaaattggcgcagtttgagtttatcaaacaacaatctaatgtt
ttaccaattttattgttagatgatatttttgataagttagatgaaaatagagtttcacaa
attattgacttggttaataatgatgaatttggacagatttttatcacagacacacatgca
gatagaactgaaaacatcttaaagcaaggaagtaaagaatatcagatttttcaattatag
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