Polaribacter vadi: LPB03_02025
Help
Entry
LPB03_02025 CDS
T04504
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pob03036
]
LPB03_02025
Chromosome and associated proteins [BR:
pob03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LPB03_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF1374
Motif
Other DBs
NCBI-ProteinID:
AOW16314
UniProt:
A0A1B8U0P8
LinkDB
All DBs
Position
complement(456208..457104)
Genome browser
AA seq
298 aa
AA seq
DB search
MKWQNAIRDYQLYLKIERGLSQNTVESYSRDLDKLTLFLEENDIKSSPISIDKTMVQQFI
YEVAKKVNPRSQARIISGLRSFFDYLVFEDYRETNPTDLLEAPKIGRKLPDTLSEEEINE
LISAVDLSHSQGERNRTILETMYSCGLRVSELVTLKISDLFFEEGFIKVTGKGNKERFVP
IHYNAQKYITIYISEIRSHLKPSKGFEDTLFLNRRGKGLTRQMIFTILKDLSAKINLNKK
ISPHTLRHSFATHLLKNGADLRAIQQMLGHESITTTEVYVHLDTSYLKEVVETYHPRK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggcaaaacgcaataagagattatcagttatacttaaagattgaacgtggttta
tctcaaaatactgttgaaagttattctagagatttagataaactaaccttatttttggaa
gaaaatgatattaaatcttctcctatttctattgataaaactatggtgcagcaatttatt
tatgaagttgctaaaaaagtaaatccaagaagccaggcaagaataatatcaggattaaga
agtttttttgattatttagtgtttgaagattacagagaaacgaatcctacagatttatta
gaagctccgaaaattggcagaaagttacctgatactttatccgaagaagaaataaacgaa
ttaatttctgctgttgatttgagccattctcaaggtgaaagaaacagaactattttagaa
accatgtacagctgtggtttaagagttagtgaattagttacactaaaaatttctgattta
ttttttgaagagggctttataaaagttacaggaaagggaaataaggaacgttttgtacct
attcattacaatgctcagaaatacataactatatatatttctgaaattagaagtcactta
aaacctagcaaaggttttgaagacacactctttttaaacagaagaggaaaaggcttaaca
agacaaatgatttttacaattttaaaagatttatcagcaaaaataaacctaaataaaaaa
ataagtccacatactttaagacattcctttgctacacatttattaaaaaatggagcagat
ttaagagcgatacaacaaatgctaggtcatgaaagcattaccacaacagaagtatatgta
catttagatacaagctatttaaaagaggttgtagaaacgtatcatcctagaaaataa
DBGET
integrated database retrieval system
