Polaribacter vadi: LPB03_03225
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Entry
LPB03_03225 CDS
T04504
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pob
Polaribacter vadi
Pathway
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB03_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_03225
Enzymes [BR:
pob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB03_03225
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB03_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
ATPase_2
Cript
AAA_19
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AOW18979
UniProt:
A0A1B8TYF3
LinkDB
All DBs
Position
complement(710611..713034)
Genome browser
AA seq
807 aa
AA seq
DB search
MLPIPIQKTFTYSVTNEEANFLNEGMRVAVSFGKTKMFTGLVFKIHENAPTLYEAKEIHQ
ILDEQPLVNNLQLKHWQWISTYYMCSLGDVFRAALPSAFLLESETIVYKNEAFNNEDILE
DDEFLIFEALQHQSQLTIHQVVDILGKKKVMPTVNELIKKSAIYIKEQIYEQYKPKLVKY
VRLHASYNSDESLNALLEELSRAKKQRDAVLTFFQLSTTKKPIKAKDLETKANVSASVLK
SLVDKNIFEFYEIQIDRINFKGDTNDLKELNEFQETALKEIKETFTNNDVTLLHGITSSG
KTEVYTKLIQEVLDAGKQVLFLLPEIALTTQIITRLQVYFGDQISVFHSKYSMNERVEVW
NNVLENKSKAQIILGARSSIFLPFSNLGLIVVDEEHETSYKQFEPSPRYNARDSAIVLSK
LHNAKILLGSATPSLESYFNAQQNKYGFVELNRRFGNVQLPKIELIDVKEKHRKKEMKGH
FSDRMLKLIQEALDEKEQIILFQNRRGYSPVVECKTCGVAPQCPNCDVSLTYHKFKNELR
CHYCNYQRAMPNSCAACGSNTLDTKGFGTEQIELELKELFPDFKIGRMDLDTTRGKFGYQ
KIIGAFEAREIDILVGTQMLSKGLDFDNVSLVGILNADTMLNFPDFRAHERAYQMMVQVS
GRAGRSKKQGNVAIQTYNPYHKILQQVSSTNYTEMYKEQLQERWQYKYPPYFRTIKITLK
HRDFNKVDTGVNWLFKALYNSFGENVLGPTAPAVSRIRNQYIKNIVIKIPPKQSLANTKN
QVTKIRNTFEAVKDFRPIRFIIDVDNY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atattacccataccaattcagaaaactttcacgtattctgtaaccaatgaagaagcaaac
tttttaaatgaaggcatgcgtgttgctgtttcttttggcaaaactaaaatgtttacgggt
ttggtttttaagattcatgaaaacgcaccaactttatatgaagccaaagaaattcatcaa
attttagatgaacaaccccttgtaaataatttacaattaaaacattggcagtggatttct
acgtattatatgtgttctttgggtgatgtttttagagctgctttaccctctgcattctta
ttagaaagcgaaacaattgtttacaaaaacgaggcttttaataacgaagatattttagag
gacgatgagtttttaatattcgaagctttgcaacatcaatctcaattaacaattcatcag
gttgtagatattttagggaagaaaaaagtaatgccaactgttaatgaattgattaaaaaa
tctgctatttatattaaggagcaaatttatgagcaatacaaaccaaaattagtaaaatat
gttcgtttacatgcctcttataattctgatgaatctctaaatgcacttttagaagaatta
tctagagcaaaaaaacaacgagatgcagtactaactttttttcagttatcaactacaaaa
aagcccataaaagcgaaggatttagaaaccaaagcaaatgtttctgcatcagttttgaag
tctttggttgataaaaatatttttgagttttatgaaattcaaatagatagaattaatttt
aaaggcgatacaaacgatttaaaagaactaaacgaatttcaagaaaccgccttaaaagaa
atcaaagaaacttttacaaataatgatgtaacacttttgcacggaataacaagttctgga
aaaacagaagtgtacacaaaattaattcaagaagttttagatgcaggaaaacaagtattg
ttcttgttgccagaaattgcattaacaacacaaataattacacgtttacaagtttatttt
ggagatcaaatttcggtatttcactccaaatattctatgaatgaaagagtagaagtttgg
aataatgtgttagaaaacaaaagtaaagcacaaattattttaggagcaagatcatctata
tttttaccattttctaatttagggttgattgtggtagatgaagaacatgaaacttcttac
aaacagtttgagccttctccaagatataatgcacgtgattcagccattgttttatcaaaa
ttacataacgcaaaaattttattaggttctgcaacaccctctttagaaagctattttaat
gcacagcaaaacaaatatggttttgtggaattaaatagacgttttggaaatgttcaactc
ccaaaaatagagttgattgatgtgaaagaaaagcacagaaaaaaggaaatgaaaggtcat
ttttctgatagaatgcttaaattaattcaagaagctttagatgaaaaagagcaaattatt
ctatttcaaaatagacgtggatattcgcctgtggttgaatgcaaaacctgtggagtggct
cctcaatgcccaaattgcgatgtttctttaacgtatcataaatttaaaaacgaattacgt
tgccattattgcaattatcaacgagcaatgcccaatagttgtgctgcttgtggaagcaat
actttagatactaaaggttttggaactgagcaaattgaattagaattaaaagaattattc
cctgattttaaaattggaagaatggatttagatacgactcgtggaaaattcggatatcaa
aaaataattggcgcttttgaagcaagagaaatcgatattttggtaggaacacaaatgctt
tccaaagggttagattttgataatgtttctttagtgggaattctaaatgcagataccatg
cttaattttccagattttagagcacatgaaagagcgtatcaaatgatggtgcaagtttct
ggaagagcaggaagaagtaaaaaacaaggaaatgttgcaattcaaacctacaatccttat
cataaaatattacaacaggtttctagcacaaactatacagaaatgtataaagaacagttg
caagaacgttggcaatataaatatcctccttattttaggacgataaaaattacactgaaa
cacagagattttaacaaagttgacactggtgtcaattggctttttaaagcgctttataat
tcttttggagaaaatgttttaggcccaacagcgcctgcagtttctagaattcgaaatcaa
tatataaagaatattgtgattaaaattccaccaaaacaaagtttagcaaacacaaaaaat
caagttactaaaataagaaatacctttgaagctgtaaaagattttagaccaattaggttt
attattgatgttgataattattag
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