Polaribacter vadi: LPB03_03375
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Entry
LPB03_03375 CDS
T04504
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pob
Polaribacter vadi
Pathway
pob03030
DNA replication
pob03430
Mismatch repair
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB03_03375
03430 Mismatch repair
LPB03_03375
03440 Homologous recombination
LPB03_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pob03032
]
LPB03_03375
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_03375
Enzymes [BR:
pob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB03_03375
DNA replication proteins [BR:
pob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB03_03375
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB03_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_14
AAA_30
Rad17
AAA_5
RCF1-5-like_lid
TIP49
DNA_pol3_delta_C
AAA_16
ResIII
AAA_24
DNA_pol3_gamma3
AAA_7
nSTAND3
Mg_chelatase
AAA_assoc_2
DUF815
Sigma54_activ_2
RNA_helicase
AAA_2
AAA_18
NPHP3_N
T2SSE
AAA_28
NACHT
Sigma54_activat
TsaE
GNAT_acetyltr_2
Motif
Other DBs
NCBI-ProteinID:
AOW16565
UniProt:
A0A1B8TY60
LinkDB
All DBs
Position
741796..743493
Genome browser
AA seq
565 aa
AA seq
DB search
MEHFIVSARKYRPQNFEDVVGQQAITNTLENAIKNNHLAQALLFTGPRGVGKTSCARILA
KKINQQDVEASADEDFAFNIFELDAASNNSVDDIRSLTDQVRIPPQTGKYKVYIIDEVHM
LSQAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIFDFKRIGVLDAKNYLKVI
CEKEDITAEDDALHIIAQKADGAMRDALSIFDRVVSFSGKNLTREAVTENLNVLDYDTYF
NMTTLLMENKIPDVLNAYNTVLGKGFEGHHFINGLASHFRDLLVAKDKVTIDLLEVGDTA
KKKYLEQSTKASIPFLMQSINKANDCDLNYRTSKNQRLLVELTLMQIASITFDGEKKKPA
NYIIPATFFQSLSPAVKEIAKPVQQKVAPSTHQKTQKVEVPKPKLNKPILQSAQRRSSSL
SLKSIHEKKVEKKSVVEENFDNHPKDIFTEKALQEFWKEYVALLQQKGERSMASIVGTDV
PKLGKDFKISFTVPNKLMEDQFKKGRPMLLKFLREKLNNYGIKIIVTLNETVEKKFAYTP
QEKFNKMKEMNPLLEKLRQTFELDL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttatagtttctgcacgtaaataccgtcctcaaaattttgaagatgttgtt
gggcaacaagccattacaaacacgttagagaacgctataaaaaacaatcatttagcacaa
gccttattatttacagggccaagaggagttggtaaaacatcttgtgcaagaattttagca
aaaaaaataaatcaacaagatgttgaggcatcagcagatgaagattttgcctttaatatt
tttgaattagatgctgcttctaacaattctgtagatgatattaggagtttaacggatcaa
gttcgtattccaccacaaacaggaaaatataaagtgtatattattgatgaagtgcacatg
ctttctcaagcagcctttaatgctttcctaaaaacgttggaagaaccaccagctcacgct
atttttattttagcaactacagaaaaacataaaataattccgacgattttatcacgttgt
caaatttttgattttaaaagaattggtgtcttagatgcaaaaaactacttgaaagttatt
tgcgagaaagaagatattactgctgaagatgatgctttgcatattattgctcaaaaagca
gatggagccatgagagacgctttatctatttttgatagagtagttagtttttctggcaag
aacttaacaagagaagctgtcacagaaaatttaaatgtattagattatgatacatatttt
aatatgacaactttattgatggaaaataaaattcctgatgttttaaatgcatacaataca
gttctaggaaaaggttttgaaggtcaccattttataaatggattggcgagccattttaga
gatttgttagttgccaaagataaagttactattgatttattagaagttggtgatactgcc
aagaagaaatacttagaacaatctaccaaagcaagcattccttttttaatgcaatctatt
aacaaagcaaatgattgtgatttaaattatagaactagcaaaaaccaacgattactggtg
gaattaaccttaatgcaaattgcctctatcacttttgatggagaaaaaaaaaaaccagct
aattacataattcctgcaacattttttcaatcgctttctcctgcagttaaagagattgca
aaacctgttcagcaaaaagttgcgccttcaacacatcaaaaaacccaaaaagttgaagtg
ccaaagccaaagctaaacaaacctattttacagtctgcacaaagacgatcatcatcactt
tctttaaaaagtattcacgagaaaaaagttgaaaaaaaatctgtagttgaggaaaatttc
gacaatcatccaaaagatatttttacagaaaaggctttacaggaattttggaaagaatat
gttgctttacttcagcaaaaaggagaacgaagtatggcctctattgttggtacagatgtt
cctaaattggggaaagattttaaaatttcttttacagtgcctaataagttgatggaagat
caatttaaaaaaggaagaccaatgttattaaaatttttacgtgaaaaactaaataattac
ggaattaaaattattgtgacactcaatgaaactgtagaaaaaaagtttgcttacactcca
caagaaaagtttaataaaatgaaggaaatgaatcctttgttagaaaaattacgccaaact
tttgaattagatttgtaa
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