Polaribacter vadi: LPB03_03870
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Entry
LPB03_03870 CDS
T04504
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_03870
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB03_03870
Archaeal homologous recombinant proteins
LPB03_03870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
CENP-H
Motif
Other DBs
NCBI-ProteinID:
AOW16655
UniProt:
A0A1B8TXU8
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All DBs
Position
852386..853588
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AA seq
400 aa
AA seq
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MKILHTADWHLGHRLHDQSQFEEQNLFLNWIENYIITQKIEVLLISGDIFDSGSPSNQSL
EMYYSFLVKLNNTCCKSIIITGGNHDSPGTLNAPKHILNALSIKVVGKATEHIEDEVFKL
NINSEELIIAAVPYLRDGDIRRAVAGESFEDLTDKYKKALINHYESAAEECKKININNAP
VIAMGHLFATGGSVSDSEQNIYVGTLGHIGANDFPTYFDYVALGHLHRPQIIGGNEKIQY
SGSPNILSFSEVNYDKKIKVLSTENNKITTIDDVILPNFREFYRLSGTIQECMNLFPTII
SNSFGLTPWVEIVLKEDHTINTDDLKKEAEKYSFEILKISLKNQKKQKGIEELLKETKSI
KELNPTEVFKLKCEEMNFDLQENPQIWDAFNEILQSVKNQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcacacagcagattggcatttaggacatagattgcatgatcaatctcaa
tttgaggaacaaaatttgtttttaaattggattgaaaattacatcatcactcaaaaaatt
gaagtgcttttaatttctggtgatatttttgattcaggctctccatccaatcagagtttg
gaaatgtattatagttttctggtaaaattgaataacacttgttgcaaatcgattataatt
actggtggaaatcatgattctccaggaactttaaacgcgccaaaacatattttaaatgca
ctttctataaaagtagttggtaaagccactgaacatattgaagatgaagttttcaaactc
aatattaacagtgaagaattgattattgctgcagttccttatttaagagatggagatatt
agacgtgcagttgcaggagaatcttttgaagatttaactgataaatacaaaaaagcattg
ataaatcattatgaatctgcagctgaagaatgcaaaaaaataaatataaataatgctcct
gtaattgcaatgggtcatttatttgcaactggaggatcagtttctgacagcgaacaaaat
atttatgtgggaactttaggacacattggcgctaatgattttcctacttattttgattat
gttgctttaggacacttacacaggcctcaaattattggtggaaatgaaaaaattcaatat
tctggttctccaaatattttaagttttagcgaagttaattatgataaaaagataaaagtt
ttatcaacagaaaataataaaattacgactattgatgatgtgattctccctaattttcga
gaattttatcgactttctggaactattcaagaatgtatgaatttgtttccaactattatt
tctaattcgtttggtttaactccttgggtagaaattgttttgaaagaagaccataccata
aatacagatgatttaaaaaaagaagctgaaaaatattcttttgaaattttaaaaatttcc
ttaaaaaaccaaaaaaagcaaaaaggaattgaggaattgttgaaagaaacaaaatcgatt
aaagaattaaacccaactgaagtttttaaattaaaatgcgaggaaatgaattttgacttg
caggaaaatccacaaatttgggatgcttttaatgaaattttacaaagtgttaaaaatcaa
taa
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