Polaribacter vadi: LPB03_04995
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Entry
LPB03_04995 CDS
T04504
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pob
Polaribacter vadi
Pathway
pob03030
DNA replication
pob03430
Mismatch repair
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB03_04995
03430 Mismatch repair
LPB03_04995
03440 Homologous recombination
LPB03_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pob03032
]
LPB03_04995
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_04995
Enzymes [BR:
pob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB03_04995
DNA replication proteins [BR:
pob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB03_04995
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB03_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AOW16862
UniProt:
A0A1B8TXJ5
LinkDB
All DBs
Position
complement(1116309..1119263)
Genome browser
AA seq
984 aa
AA seq
DB search
MYLNCHTYYSLRYGTFSETELLQLALENNVHTLALTDINNTSACMNFVQQAKKANIKPVV
GVDFRNGNTQQFVALAKTNLGFQNINRFLSSFLESKTSIPEQPPFLEEVIIIYPFEKVLE
LNITNFKENEFIGISLAEVNKLRFSYLNEFTDKIVIQQQVTIRNKKDFNAHRILRAIDKN
TLLSKLEASEQCLETDKMYQVDDLQNHFKDFPNAIKNTQVILNQCNINFGFGKERTNQNL
QRYNNSFEEDCKQLNQLCQSKIAKRYKEITEEVNNRLQKELKVIIDLKFVSFFLINYDII
QHANSNNFFHVGRGSGANSIVAYILGITDVDPIELDLYFERFINPFRASPPDFDIDFSWK
DRDIMTQYIFDRFKNVALLATYVTFKYKAVVRELGKVFGLPKEEIDKLSKGIVVGQLDEM
ANLVLKYGKLIEGFPNYVSVHAAGVLILDKPIHYYSATNLPPKNFPTVQFDMNIADDVGI
FKFDILGQRGLAKIKDALEIIKENNPDAPKIDITDVATFKKDKNINNLLKTGGAIGAYYV
ESPAMRGLMQKLQTQDYLGLVAASSIIRPGVSSSGMKEEFIKRHRFPEKRKEANPILLKI
MPETYGVMVYQEDVMKVANQFADLKLGEADVLRRGMSGKYRSLKEFKAVEEKFIANCRKK
GHKDELIFKVWDQIKSFAGYAFAKGHSASYAVESYQSLFLKCYYPIEFMVAVLNNGGGFY
TAEHYIHEAKMCGAKIELPCINQSDHANRVKGKTIFLGFGYLKSLEQLTIQRILNERQLV
GTFSSLDDFLERVRISIEQLSILIRMDAFRFTNKAKTTLLWEATFKLNVSKNRKNQQAAL
FRIQQKKFQIPELQSNWVENFYDEIELLGFTIQNYFSLVIDEFHPHIKAKEMAQFPDQNV
LLYGQLVTTRFNQTSQGKLMRLSTFIDAEGNYFDAVHFTNVVHQYPINGMGVYACYGKIT
NRFGFCSMNIIQSKKMSIATDPRS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaattgtcatacatattattcactaagatatgggacgttttctgaaaccgaa
ttgctacaactggcgttagaaaataacgtccacacattagcgttaacagacatcaacaat
acatctgcctgtatgaattttgtgcaacaggctaagaaagcaaacatcaaaccagtggta
ggggtagatttcagaaatgggaatactcaacaatttgtggccttggctaaaaccaattta
gggtttcaaaatatcaatcgttttttatcctcttttttagagtcaaaaactagcatacca
gaacaacctccttttttagaagaggtgattattatttatcctttcgaaaaagttttagaa
ttaaatataaccaactttaaagaaaatgagtttatcggcatctcattggctgaggtcaat
aaattacggttctcttatttgaatgaattcacagataaaatagtaatccaacaacaagtt
acaataagaaataaaaaggatttcaatgcacataggatattaagagcaattgataaaaat
accttactaagcaagttggaggcatcagagcaatgcctcgaaacggataaaatgtaccag
gtagatgatctgcaaaatcattttaaagattttccgaatgccattaaaaatacccaagtc
atacttaaccaatgcaatatcaattttggttttggcaaagagcgtacaaatcaaaactta
caacgatataacaatagcttcgaagaggattgcaaacagttaaatcagttgtgtcagagt
aaaattgcaaagagatataaagagatcacagaggaggtgaacaaccgacttcaaaaggaa
ctaaaagtcatcatcgatttaaaatttgtgtctttttttctgatcaattacgacataatt
caacacgcaaatagtaacaatttttttcatgtgggtagaggtagtggcgcaaacagcatt
gtggcgtatattttaggaattacagatgtagatcccattgagttagatttatatttcgaa
agatttatcaatccttttagagcttctcctccagattttgatatcgatttttcatggaaa
gatagagatataatgacccaatatattttcgatcgatttaaaaatgtggcactgttagca
acttatgtaacctttaaatacaaagctgtagtgcgagaattgggtaaggtgtttggcttg
ccaaaagaagaaatagacaaactaagcaaaggaattgttgtagggcaattagatgagatg
gctaatttagttttaaaatatggaaaacttatcgaaggatttccaaattatgtaagtgta
catgctgcaggcgttttaattctagacaaaccaattcattactattcagctaccaactta
ccgcctaaaaattttccgacagtacagtttgatatgaatattgcggatgatgtagggatt
tttaaattcgatattttagggcaacgtggcttggcaaaaattaaagatgccttagagatt
atcaaagaaaataaccctgatgctcctaaaattgatattacagatgtagcaacgtttaaa
aaggataaaaacatcaacaaccttttaaaaacaggaggtgctattggtgcgtattatgta
gaatctcctgcaatgcgtggtttaatgcaaaaattacaaacccaagattatttaggtttg
gtagccgcgagttctatcataagaccaggagtttctagttctggaatgaaagaggaattc
atcaaaagacatcgttttcctgaaaaacgaaaagaggcaaatccaatattattaaaaata
atgcctgaaacttatggggtcatggtatatcaagaagacgtaatgaaagtggcgaatcaa
tttgcagatttaaagttgggagaagccgatgtgttacgaagaggaatgagtggcaaatac
cgttcactcaaagagttcaaagctgtagaagaaaagttcattgcaaattgtagaaaaaag
ggacataaagacgagttaattttcaaagtatgggatcaaatcaaaagctttgcaggctat
gcttttgcaaaagggcactcggcttcgtatgctgtagaaagttatcagagtctatttttg
aaatgctattaccctatagaatttatggtggcagtattaaataatggtggaggtttttat
acagcagaacattacattcacgaagcaaaaatgtgtggtgctaaaatcgaattgccttgt
atcaatcaaagcgaccatgcaaatagggtaaaaggcaaaaccatttttttagggtttggg
tatttaaaaagtttagagcaattaaccattcagcgtattttaaatgaaagacaattggtt
ggcacttttagctctttggatgattttctagaacgtgtaagaatttcgatagaacagctc
agtattctaattcgcatggacgcatttcgttttacaaacaaagccaaaaccactttgttg
tgggaggccacatttaaattaaatgtctcaaaaaatagaaaaaatcaacaagcagcatta
tttcgcatacagcaaaaaaagtttcagataccagaactacaatcaaattgggtagaaaat
ttttatgacgaaatcgagttgttgggctttaccattcaaaattacttttcattggtgata
gatgaatttcatccccacatcaaggcaaaagaaatggcacaatttccagatcaaaatgtc
ttattatatggacaattagtaaccacgagatttaaccaaacttcccagggtaagttaatg
cgattaagcacgttcatagatgctgaaggcaattatttcgatgcagttcattttacaaat
gtggtccatcaatatcctataaacggaatgggagtctatgcctgttatggtaaaatcacc
aaccgatttggtttttgcagcatgaatattatccaatcaaaaaaaatgagcatcgcaaca
gacccaagaagttaa
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