Polaribacter vadi: LPB03_05435
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Entry
LPB03_05435 CDS
T04504
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pob
Polaribacter vadi
Pathway
pob03030
DNA replication
pob03430
Mismatch repair
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB03_05435
03430 Mismatch repair
LPB03_05435
03440 Homologous recombination
LPB03_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pob03032
]
LPB03_05435
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_05435
Enzymes [BR:
pob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB03_05435
DNA replication proteins [BR:
pob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB03_05435
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB03_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOW16939
UniProt:
A0A1B8TX58
LinkDB
All DBs
Position
complement(1226519..1227346)
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AA seq
275 aa
AA seq
DB search
MNLKLKQPIVFFDLETTGVNIAKDRIVEISILKVFPNGNKESKTWLVNPEVEIPAESTAV
HGITNEKVAGEPTFKELAAKINKMITGCDLAGFNSNRFDIPLLAEELMRVGIDFDMNGRK
AIDVQVIFHKKEQRTLGAGYQFYCGKELEGAHGAEADTNATYEILLAQVEKYGDIGNTVE
ALSEYSTHGERADFAGFILMNDDKQEIFSFGKYKGRTVEEVFVENPGYNNWIQNADFPLY
TKKVLKGIKERMSAPKDTMSDADKLTALQQKFNLR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttaaaattaaaacagccgattgtatttttcgatttagaaacaacaggtgtaaat
atagccaaagatagaattgtagaaatatctattttaaaagtgtttccaaatgggaataaa
gagagtaaaacatggttggtaaatcctgaagtagaaattcctgcagaatctacagcagtt
catggaattacgaatgaaaaagtagctggagaaccaacttttaaggaattagcagccaag
attaataaaatgattacaggttgtgatttagcaggttttaattctaatagattcgatatt
cctttattggcagaagaattaatgcgagttggaatcgattttgatatgaatggaagaaaa
gcaattgatgtgcaagtaattttccataaaaaggagcaaagaacattaggagctgggtat
caattttattgcggaaaagaattagaaggcgctcatggagcagaagctgatacaaacgca
acctatgagattttgttggcacaagttgaaaaatatggagatattggaaatactgtagag
gctttaagcgaatattctacacatggagaaagagccgattttgctggttttattttgatg
aatgatgataaacaagaaattttttctttcggaaaatacaaaggaagaacagttgaagaa
gtgtttgtagagaatcctggttataacaattggattcaaaatgcagactttccattatac
acaaaaaaggttttaaaaggaattaaagaaagaatgtctgcaccaaaagacaccatgtct
gatgctgataaactaactgctttgcaacagaaatttaatttgaggtaa
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