Polaribacter vadi: LPB03_06285
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Entry
LPB03_06285 CDS
T04504
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pob02000
]
LPB03_06285
Transporters [BR:
pob02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LPB03_06285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
AOW17091
UniProt:
A0A1B8TZD0
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All DBs
Position
complement(1412393..1414009)
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AA seq
538 aa
AA seq
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MLRKINLLILGILVVFVTGCSEDFHETTPTDAIAEADAFASVNNMFLVLNGLHRIMYAQN
PLPGGTSARSGQSYYLPAFDAIGGQMIHSSPGNGWLRSEAQWLTHTNANFTTVDNFWYNR
YHIIATSNNLINLIAENDYPEADEDIRNILGQAYAYRAWAYHQLISTFAKGYLIGDPATD
AGVPLLLVTGAPYTSGPRSSVQVVYDQINDDISKSISFFNGASNPDNKSHLSINAAYGLK
ARIDLTQGNWQGAADAAVAARSGFGLLDESSWLSGFNSVELSEVIWGATVIDSETNYYQS
YFYFICPTFNGSQNRSNPKLMNKEVYDAIPSTDFRINMALPLAPNTNSSASNGQGGSFET
DPNYTDADSFWDAWEAIITKYGMTTGHNTHPYMAVKFLQKNPGSIDPDDVIYMRSSEMYL
IEAEARTMLNDVTGAQTVLQAFGSTRDSNYSAAAFGTTAALMEHIKWQRRVELFNEGFSF
HDQIRWDEGIDLTNSGADDNLYRDGFIQAKPSLNDDWIWKIPQGEIDSNPNLTEADQN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaaaaattaacctattaattttaggaatactagtagtatttgttactggttgt
tcagaagattttcatgaaacaacaccaacagatgctattgcagaagcagatgcttttgcc
agtgtaaacaatatgtttttggtattaaatggattgcatagaataatgtatgctcaaaat
ccattaccaggaggaacttcagcaagaagtgggcaaagttattacttaccagcttttgat
gcaataggaggacaaatgattcattcatcaccaggaaatggttggttgagaagtgaagca
cagtggttaacgcatacaaatgctaattttacaactgtagataacttttggtacaatcgt
tatcatattattgcaacatctaataatttaattaatttaattgcagaaaatgattatcca
gaagctgatgaagatattagaaatattctagggcaagcatatgcttatagggcttgggct
tatcatcaattaatatcaacatttgcaaaaggatatttaattggagaccctgctacagat
gctggtgtacctttattattagttactggtgctccttatacaagtggtcctagatcttct
gttcaagttgtttatgatcaaattaatgatgatatttcaaaatcaattagttttttcaat
ggagcttctaaccctgataataaatctcatttatctataaatgcagcatatggtttaaaa
gcaagaatagatttaactcaaggaaattggcaaggtgcagctgatgctgctgtagctgct
cgttctggttttggtttattagatgaaagctcttggttgtctggttttaattctgtagaa
ctttctgaagtaatttggggagcaactgttattgattcagaaacaaattattaccaatct
tatttttattttatttgccctacttttaatggtagtcaaaatagatctaaccctaagtta
atgaataaagaagtgtatgatgcaataccatctacagattttagaattaacatggcttta
ccattagctccaaatacaaattcttcggcttctaacggtcaaggtggtagctttgaaact
gatccaaattatactgatgctgattctttttgggatgcttgggaagcaattattacaaaa
tatggaatgactacaggtcataatacacacccttatatggctgttaaattcttacaaaag
aatcctggatctatagatcctgatgatgtaatatacatgcgttcttctgaaatgtattta
atagaagcagaagctaggacaatgttaaatgatgtgacaggtgcgcaaactgttcttcaa
gcttttggatcaactagagattctaattattctgcagcagcatttggaactacagctgct
ttaatggaacatattaaatggcaaagaagagttgaactttttaatgaagggtttagcttt
catgaccaaattcgttgggatgagggaattgacttaacgaattctggagctgatgataat
ttatatagagatggttttattcaagcaaaaccttctttaaatgatgattggatttggaaa
attccacaaggtgaaattgattcaaatccaaatttaacggaagcagatcagaattaa
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