Polaribacter vadi: LPB03_06540
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Entry
LPB03_06540 CDS
T04504
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_06540
Enzymes [BR:
pob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LPB03_06540
DNA repair and recombination proteins [BR:
pob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LPB03_06540
Prokaryotic type
LPB03_06540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ELK
BsNagA_N
Motif
Other DBs
NCBI-ProteinID:
AOW17139
UniProt:
A0A1B8TZD5
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All DBs
Position
1467001..1468305
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AA seq
434 aa
AA seq
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METTINIFWFRRDLRLDDNVGFYNALKSEHKVLPIFIFDEEILSKLPKDDARVTFIFDTL
QEMRNELQEKYGSSIAMLKGKPKDVFKQLVKDHTIDTVFTNRDYEPYAKERDAKIATLLS
KENINFKTFKDQVIFEKHEVVKSDGDPYKVYTPYMKLWKKEFEKIDLKIYYTNQFLDNLI
ENSRLTNVSLADIGFKKSTQKIAAFTVTPTLIQEYEDTRNFPAQDSTSKLGPHLRFGTAS
IRKMIKKAIAEKNEIFWQELIWREFFAQILWHFPHTKDKAFKSKYDRIEWRNNEHEFKKW
CNGETGYPLVDAGMRQLNETGFMHNRIRMLVGSFLCKHLLIDWRWGEAYFAEKLHDYEMA
SNVGNWQWVAGSGVDASPYFRIFNPTTQIKKFDKDLKYIKKWVPEFQELTYAKEIVDHKE
ARERCLKVYKDAVS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaactacgattaatatattttggtttagaagagatttacgtttagatgataatgta
ggcttttacaatgcattaaaatccgaacataaagttttacctatttttatttttgatgaa
gaaattctatcaaaattaccaaaagatgatgctagagttacttttatttttgatacgctt
caagaaatgagaaacgaactgcaagaaaaatatggaagcagtattgccatgctaaaagga
aagccaaaagatgtttttaagcaattagtaaaagatcataccattgacactgtttttaca
aatcgagattatgagccgtatgcaaaagaaagagatgccaaaatagcaacacttttatct
aaagaaaacatcaattttaaaacatttaaagatcaagttatttttgagaaacatgaagtt
gtaaaaagcgatggagatccttacaaagtgtacactccatatatgaaattatggaaaaaa
gaatttgaaaaaatcgatttaaaaatttattacacgaatcaatttttagacaatttaatt
gagaattcaagattaacaaatgtatcacttgctgatattggttttaaaaaatcaacgcaa
aaaatagcagcttttacagttacaccaacgttaattcaggaatatgaagacactcgtaat
tttcctgcacaagattctacctctaaattaggaccacatttgcgttttggaactgcaagt
attagaaaaatgataaaaaaagctattgcagaaaaaaacgaaatcttttggcaagaatta
atttggagagaatttttcgcgcaaattctttggcattttcctcatacaaaagataaagct
tttaaaagcaaatacgatagaattgaatggagaaacaacgaacacgaatttaaaaaatgg
tgtaatggagaaactggatatcctttagtagatgcaggaatgcgtcaattaaacgaaact
ggctttatgcacaacagaattagaatgttggtgggtagttttttatgcaaacatttgttg
atagattggagatggggagaagcctatttcgcagaaaaattacacgattatgagatggca
agcaatgttgggaattggcaatgggttgcaggttctggagtagatgcatcaccttatttt
agaatttttaacccaacaacgcaaattaaaaagttcgataaagatttaaaatacatcaaa
aagtgggttcccgaatttcaagaattaacctacgctaaagaaatcgtagatcataaagaa
gcaagagaacgttgcttaaaagtatataaagatgctgttagttaa
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