Polaribacter vadi: LPB03_07245
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Entry
LPB03_07245 CDS
T04504
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pob03016
]
LPB03_07245
Enzymes [BR:
pob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LPB03_07245
Transfer RNA biogenesis [BR:
pob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB03_07245
Prokaryotic type
LPB03_07245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOW17270
UniProt:
A0A1B8TYR9
LinkDB
All DBs
Position
complement(1622959..1623741)
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AA seq
260 aa
AA seq
DB search
MKYSVSYLISLQFFGFRFSGWQKQTNAKTLHDIVDKSLSFIMEEGSYKTIGVGRTDAKVS
ANSYYLQLFTNEILEEEAFIKTLNLNFPPDFRAISMQEVARSFNIIKADKIKEYHYYFSF
GEKNHPFAAPFMVNIDTFLDIDVMKKGAKLFEGEHYFHKYCTKPSEKTIFKRVIDTCEIV
ENDILVANFFPEKSYVFKVKGKGFLRYQIRLMMATLFELGKGNIDLQFIEASLKEDNDRL
FMRNNAPSSGLQLYNIKLKL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattcagtttcttacctaatttctttacaattcttcggttttcgtttttctggt
tggcaaaaacagacaaatgccaaaactttgcatgatatagtcgataaaagcttgtctttt
ataatggaagagggtagttataaaacgattggtgtgggtagaacagatgcaaaagtttca
gcaaattcctattatttacagctttttacaaatgaaattttagaagaagaggcttttata
aaaactttaaatttaaattttccaccagattttagagcgatttctatgcaagaggttgcc
aggagtttcaatattattaaagctgataaaataaaagaataccattattacttttctttt
ggtgagaaaaatcatccttttgcagcgcctttcatggtaaatattgatacctttttagat
attgatgtgatgaagaaaggcgcaaaactatttgagggggaacattattttcataaatat
tgtaccaaaccctctgaaaaaacaatttttaaaagagttattgatacttgtgaaattgtt
gaaaacgatattttagtcgctaatttttttcctgaaaagtcctatgtatttaaagtgaag
ggaaaaggttttcttcggtatcaaatacgtttaatgatggcgactttatttgaactcgga
aaaggaaatattgatttacagtttattgaagcttctttaaaagaagataatgatcgtttg
tttatgagaaataatgcgccttcttctggtttgcaactctataatattaagttgaaattg
tag
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