Polaribacter vadi: LPB03_08600
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Entry
LPB03_08600 CDS
T04504
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pob
Polaribacter vadi
Pathway
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB03_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_08600
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB03_08600
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LPB03_08600
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AOW17521
UniProt:
A0A1B8U303
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Position
complement(1916517..1917239)
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AA seq
240 aa
AA seq
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MGIVNTKAIVLSSLKFGDTSLIVKCYTEEEGVKSYLIRGVLKPKKTGIKAAYFQPLTQLK
IIAKHNTKGTLNSIKEVQVVNPYKTIHTDIIKQSVVFFLSEILASSIQEEEQNKALYSYL
ETAFIWLDVHDKIANFHLLFLLNLTGFLGFYPDTSKKDKIGFNLLEGKFSDNTADKNVLF
KNDLYQFKKLLGINFDGIENVSYSKDERQLVLQMIIEYFKLHLDSFRKPKSLQVLETIFS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgtaaatacgaaagcaattgttttaagttcactaaaattcggtgatactagt
ttaattgtaaaatgttacacagaagaagaaggtgtaaaaagttacttgataagaggtgtt
ttaaaacctaaaaaaacaggaattaaagcagcctattttcagccattaacacaactaaaa
attattgcaaaacacaatacaaaaggtactttaaattccattaaagaagtgcaagttgta
aatccttacaaaacaattcatacagatattattaaacaatctgtcgtgttttttttatca
gaaattttggcaagttccatacaagaagaagaacaaaataaagcgctgtacagttattta
gaaactgcttttatttggttagatgtacatgataaaattgcaaattttcacttacttttt
ttattgaacttaacaggttttttaggcttttatccagatacatcaaagaaagataaaatt
ggatttaatcttttagaaggtaaattttctgataatactgctgataaaaatgtgcttttt
aaaaatgatttatatcaatttaaaaagctgttaggcataaattttgatggtatagaaaat
gtgtcttatagcaaagacgaaaggcagttggttttgcaaatgataattgagtattttaag
ttacatttggacagttttagaaaaccaaaatctttacaagttttagaaaccatttttagt
tga
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