KEGG   Polaribacter vadi: LPB03_09410
Entry
LPB03_09410       CDS       T04504                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pob  Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:pob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pob03400]
    LPB03_09410
Enzymes [BR:pob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LPB03_09410
    5.6.2.6  RNA 3'-5' helicase
     LPB03_09410
DNA repair and recombination proteins [BR:pob03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LPB03_09410
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII VPS11_C
Other DBs
NCBI-ProteinID: AOW17669
UniProt: A0A1B8U3I5
LinkDB
Position
complement(2123697..2126099)
AA seq 800 aa
MAEKGHTPFSFQDQTWERYHNSFSGMVVAPTGFGKTFSVFLAVVIDYLNHPERYKKGLKL
IWISPLRSLAKDLAKAMNEVVDEIGLDWEVAVRNGDTPTNIRRKQERLMPDVLLTTPETL
HLLFSQKKNSRWFKNVNCIAVDEWHELLGSKRGVLVELAIARVRNLSKKTSVWGITATIG
NLEEAKNVLIPYEGVKTTMIKAKEKKKIEIISVLPDEVEELSWAGHLGKKMSSKIIPIIY
ENNTTLIFTNTRNQSELWYQILIEEAPDLIGQIAIHHGSIAKVQRNFIEEAISQGILKAV
VCTSSLDLGVDFKPVDCVIQIGSAKGIARFLQRAGRSGHSPFETSKMYAVPTHSLQLIEV
AAVKEAVKQNEIEARYPYVLTYDILVQFLVTLAVGEGFNKEETYQFIKEIHTFHYLTKED
FDWCIHFITQGGNTLKSYEEFHKVVLDEEDGLYKVKSRRIAMMHRMNIGVIVGEVMLFVK
FFSGGYIGMVEEYFISKLKKGDAFVIGGRVVEMKQIKDMTVLVKASKSKKAITPSWNGGR
LPLTSGLTHFLRLKLSDAIDANNRERELKFLHPLLKRQQEKSHIPRHDEFLTELIETKDG
FYLFMYPFEGRLVHEIMASLIAYRLSKIKPLTFTIAQNDYGFELLSDQEIPLNEENIAQI
LSKENLMKDIIASINASEMASRKFRDIAVVAGLVIQSQPGNKKSNKSLQSSSGLIFRVLN
DYEPTNLLLKQAYDEVFNYQLEKVRLQKAFERITESKIILKRAKDFTPLSFPLKVDSLRG
TMTNEELSKRIQRIQKQAVK
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggcagaaaaagggcacacaccttttagttttcaagaccaaacttgggaacgttatcac
aatagctttagtggaatggtggttgctccaacgggttttggaaaaacattttcggttttt
ttagctgtggttattgattatttaaatcacccagaaagatataaaaaaggcttaaaatta
atttggattagtcctttgcgttctttggcaaaagatttggcgaaagccatgaatgaagtt
gtagacgaaattggtttggattgggaagttgctgtgagaaatggagatacaccaaccaac
atccgaagaaaacaagagcgtttaatgccagatgttttactaacaactccagaaacttta
cacttactattctctcaaaagaaaaattcacgttggtttaaaaacgtaaactgtattgct
gttgatgaatggcacgaattgttaggttctaaaagaggcgttttagtagaattggcaatt
gcaagagtcaggaatttatcaaaaaaaaccagtgtttggggaattacagcaactattggt
aatctagaagaagcaaaaaatgtgctaattccttatgaaggtgtaaaaaccaccatgata
aaagcaaaggaaaaaaagaagattgaaattatttcagttttgccagatgaagtagaagaa
ctgtcttgggcaggacatttggggaagaaaatgagtagcaaaatcatcccaattatttat
gaaaacaacacgactttaatttttacaaacacaagaaatcagagcgaattatggtatcaa
attttaattgaggaagctccagatttaattggacaaattgccattcatcatggttctatt
gcaaaagtgcagcgtaattttattgaagaagctatttctcaaggaattttaaaagcagtc
gtttgtacatcatctttagatttaggagtcgattttaaacctgtagattgtgtgatacaa
attggttccgcaaaaggaattgcacgttttttacaaagagcaggtagaagtggacattcg
ccttttgaaacctcaaaaatgtacgcagttcctacacattctttacagttgatagaagtt
gcagctgtaaaagaagctgtgaaacaaaatgaaattgaagcaagatatccttatgtttta
acctatgatattttagttcagtttttggtaaccttagcagttggcgaaggttttaacaaa
gaagaaacctatcaatttataaaagaaattcacacttttcattatttaacaaaagaagat
ttcgattggtgcattcattttatcactcaaggtggaaatactttaaaatcttatgaggaa
ttccacaaagtagtgttagatgaagaagatggcctttacaaagtaaaaagcagacgaatt
gctatgatgcacagaatgaatattggtgtaattgtgggcgaagttatgttgtttgtaaaa
ttcttttctggtggttatattggtatggttgaagagtattttatatcgaaattaaaaaaa
ggagacgcttttgtaattggaggtagagttgtagaaatgaaacagattaaagacatgact
gttttggtaaaagcaagcaaatctaaaaaagcaattacaccaagttggaatggtggacga
ttgcctttaacatctggcttaacccattttttacgtttaaaattaagtgatgctattgat
gccaataatagagaaagagaactaaaatttttacatccgcttttaaaacgccagcaagaa
aaatcgcacattccaagacatgacgaatttttaacagaactcatagaaaccaaagacggt
ttttacttatttatgtatccttttgaaggacgattggtgcatgaaatcatggcttcttta
atcgcttatagacttagtaaaataaaaccactcacgtttacaattgcgcaaaacgattat
ggttttgaactactttctgatcaagaaattcccttgaatgaagaaaatatagctcagatc
ttatccaaagaaaatttaatgaaagacattattgcaagtataaatgcgagtgaaatggct
tccagaaaatttagagatattgcagtggttgcaggtttagtcattcaatctcaaccagga
aataaaaagtcgaataaaagtttacaatcttcatctggcttaatatttagagtgttaaat
gattacgaacccacaaatttattattaaaacaagcgtatgatgaggtttttaattatcaa
ctagaaaaagtgcgtttgcaaaaagcttttgagcgaattacagaaagtaaaataattttg
aaaagagcaaaagattttacacctttgagctttcctttaaaggttgatagtttgcgaggc
acaatgacgaatgaggaattgagcaaacgaattcaacgtattcaaaaacaggcagtaaaa
tga

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