Polaribacter vadi: LPB03_12450
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Entry
LPB03_12450 CDS
T04504
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
pob
Polaribacter vadi
Pathway
pob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LPB03_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pob03021
]
LPB03_12450
Transcription machinery [BR:
pob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPB03_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UCR_14kD
Spo0A_C
Motif
Other DBs
NCBI-ProteinID:
AOW18209
UniProt:
A0A1B8TTF0
LinkDB
All DBs
Position
complement(2879091..2879954)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKISKQVTNRDAKSLDKYFQEISKIGLITADEEVELALKIKKGDGKALDQLVKANLR
FVVSVAKQYQNQGLKLSDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSIMSALAD
QSRIVRLPLNKIGSISKIKKIYSKLEQRNERIPTYVEIANELDTTVSSVEQSMKNSGRHI
SMDAPFREGEDSNMYNVLQSGDSPRPDNELMKQSLTTEIDRALGTLSQKEAKVIKMFYGI
GRKSPCSLAEIGEQFDLTRERVRQVKQRAIRRLQSKSKTEFLRYYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaataagtaaacaagtaaccaatcgtgatgcaaaatctttagataaa
tattttcaagaaattagtaaaattggcttaataactgctgatgaggaagttgaactggct
ttgaaaataaaaaaaggagatggtaaagcattagatcaattggtaaaagcgaacttacga
tttgttgtttctgtggcaaaacaataccaaaatcaaggtttaaaattatcggatttaatt
aatgaaggtaatttaggcttggtaaaagctgcaaaacgatttgatgaaactagaggtttt
aagtttatttcttatgctgtttggtggattcgtcaatcaattatgtctgcattagcagat
caatctagaattgtacgtttgcctttaaataagattggaagtattagtaagattaaaaaa
atatactcgaaattagaacaacgtaatgaaagaatacctacgtatgtagaaattgcgaat
gaattagatactactgttagtagtgttgagcaaagtatgaaaaactctggcagacatatt
tctatggatgctccttttagagaaggtgaagattctaatatgtataatgttttacaatct
ggagattcgccaagaccagataacgaactaatgaaacaatctttaactactgaaattgat
agagctttaggaaccttatctcaaaaagaagctaaagttattaaaatgttttacggaata
ggacgtaaatctccttgtagtttagcagaaataggtgaacagtttgatttaacaagagaa
cgtgtaagacaagtaaaacaaagagctattagacgtttacagagtaaatctaaaacagaa
tttttacgttattatttaggataa
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