KEGG   Polaribacter vadi: LPB03_12495
Entry
LPB03_12495       CDS       T04504                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pob  Polaribacter vadi
Pathway
pob03030  DNA replication
pob03410  Base excision repair
pob03420  Nucleotide excision repair
pob03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPB03_12495
   03410 Base excision repair
    LPB03_12495
   03420 Nucleotide excision repair
    LPB03_12495
   03440 Homologous recombination
    LPB03_12495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pob03032]
    LPB03_12495
   03400 DNA repair and recombination proteins [BR:pob03400]
    LPB03_12495
Enzymes [BR:pob01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPB03_12495
DNA replication proteins [BR:pob03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LPB03_12495
DNA repair and recombination proteins [BR:pob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LPB03_12495
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPB03_12495
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 RNase_H_2 HHH_5 HHH DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AOW18217
UniProt: A0A1B8TTG4
LinkDB
Position
complement(2886567..2889410)
AA seq 947 aa
MADQKRLFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSVDRVEMFTEYKANRDATPEPINDAIPYIYEILKAMHIPIMVKDGFEADDVIGT
LSKQAEKEGYQTFMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVPEVLAKFEITDPLQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLAQFGSMENLLENTDQLKGKMKEKVETAKELG
LLSKKLATIMLDVPVTFNAKDFTLDQPDVEKVTEIFNELEFRNLLTNFLKTFADENAQKV
NSAENNTDEKSTTKKSAPIVEGQFDLFAAPGTGSVTEAQTASGFKNILNTNHFYQHIDSP
FSRKLLIDKLMQQTSVCFDTETTGLKALEVELIGIAFSFEAGKGYYVSFPEDQEETKTIL
EEFRPFFEASAIEKIGHNLKYDIKVLSNYNMPVKGNLFDTMIAHYLINPDMRHNMDVLAE
TYLNYQPVSITELIGKKGKNQLSMRVVPIKDQTEYAVEDADITYQLKEHFTGELETGNVT
KLFNEVELPLVSVLTAMEIEGININTEFLKELSVALTDDINRLEKNIYELAGEEFNIASP
KQLGIVLFENMKLVDKPKKTKTGQYKTGEDILSFLAKDHEIIRDIQEYRQYKKLQSTYVD
ALPNEINPKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRNSDYVL
LAADYSQIELRIIAALSEEETMINAFKNGEDIHASTASKVFNVDIKDVTREQRSNAKTVN
FGIVYGVSAFGLSNQTDLSRSEAKELIDTYYETYPKLKAYMASQVDFAREKGYVETVLNR
RRYLKDINSRNAMVRSGAERNAVNAPIQGSAADIIKLAMINIHNRFEKEGFKSKMLLQVH
DELVFDVPKDELEIVKPIIKFEMENAFKMDVPLDVEVGIGQNWLEAH
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggcagatcaaaaaagactttttttagttgatgcatacgcattaatttttcgtggatat
tacgcatttataaagaacccaagaattaattcaaaaggactcgatacttctgcaattatg
ggttttatgaactcgcttttagacgttattaaacgtgaaagaccagatcatttagcagta
tgttttgacaaaggtggcagtgtagacagagttgaaatgtttacagaatacaaagcaaat
agagatgcaactccagagcctataaacgacgcgatcccatatatttatgagattttaaaa
gccatgcacataccaattatggtaaaagatggttttgaggcagatgatgtgattggaaca
ctttccaaacaagcagaaaaagaaggttaccaaacgtttatggtaactccagataaagat
tttgcgcaattggtttccgaaaatatttttatgtataaaccacgttttggaggtggttat
gatatttggggcgttcctgaagtgttggcaaaatttgaaattacagatcctttgcaagtc
atcgattttcttggaatgatgggagattcttctgataatattcctggtttgcctggagtt
ggcgaaaaaactgcgaagaaatttttagcgcaatttggttctatggaaaaccttttagag
aatacagatcagctaaaaggtaaaatgaaagagaaagttgaaactgctaaagaactaggg
ttactttctaaaaaattggcaacaattatgttggatgttcctgtaacttttaatgcaaaa
gattttacgttagatcaaccagatgttgagaaagttaccgaaatttttaacgaattagag
tttagaaatttattgacaaatttcttaaaaacatttgctgatgaaaatgcacaaaaagta
aattcagcagaaaataatactgatgaaaaatcaaccactaaaaaatctgcgccaattgta
gaaggtcaatttgatttatttgcggctccaggaacaggaagtgttacagaagcacaaact
gcatctggctttaaaaatattttaaatacgaatcatttttatcaacatatagattcccct
ttttctagaaaattattaatcgataaattgatgcaacaaacatcggtttgttttgataca
gaaactactggcttaaaagcgttggaagttgagttaattggcatcgctttttcttttgaa
gctggcaaaggatattatgtttcttttccagaagatcaagaggaaacaaagacgatttta
gaagagtttagaccgttttttgaagcatcagcaattgaaaaaattggacataatttaaaa
tatgatatcaaagttttatcgaactataacatgcctgtaaaaggaaatttattcgataca
atgattgcgcattatttaatcaatccagatatgcgtcataatatggatgttttagcagaa
acgtatttgaattatcagccagtttctattacggaattgattggtaaaaaaggtaaaaat
cagctttctatgagagttgtgcccattaaagatcaaacagaatatgctgtggaagatgca
gatattacctatcaattaaaagaacattttacaggcgaattagaaactggaaacgtcaca
aaattatttaacgaggtagaattgcctttggtttctgtattaactgccatggaaattgag
ggaataaatatcaatactgaatttttaaaagaattgtcagttgcattaacggatgacatt
aacagattagaaaaaaatatttacgaattagcaggagaagaatttaatattgcctctcca
aaacagttgggaattgttctttttgaaaacatgaagttggttgataaaccaaaaaagaca
aaaactgggcaatataaaactggtgaagatattttatctttcttggctaaagaccacgaa
attattagagatattcaagaatatcgtcaatataaaaaattacaaagtacctatgttgat
gcgttgccaaatgaaatcaacccaaaaactgggcgaattcacacacaatatatgcaagca
gttgctgcaacaggaaggttgagttctaacaacccaaacttgcaaaacattcctattaga
acagaaagaggacgtgaagttcgtaaagcttttattccaagaaatagcgattatgtgttg
ttggcagcagattattctcaaattgaattgcggattattgcagctttaagtgaggaagaa
accatgattaatgcttttaaaaatggtgaagatattcatgcttcaacagcttctaaggtt
tttaatgttgatataaaagacgtaactcgtgagcaaagaagtaatgcaaaaacagtcaat
tttggtattgtttatggagtttctgcttttggattgagtaatcaaacagatttaagcaga
agtgaagccaaagaattgattgatacctattatgaaacgtatccaaaattgaaagcttat
atggctagtcaggttgattttgcaagagaaaaaggctatgtagaaacagttttaaacaga
cgtagatatttaaaagacattaattctagaaatgccatggttagaagtggtgctgaaaga
aatgctgtaaatgcacccatacaaggttctgcagcagacattataaaattggcgatgatt
aacattcacaatcgttttgagaaagaaggtttcaaatcgaaaatgttattacaagtgcat
gatgaattggtttttgatgtaccaaaagacgaattagaaattgtaaaaccaattattaaa
ttcgaaatggaaaacgcctttaaaatggatgttcctttagatgtagaagttggtattggt
caaaattggttggaagcgcattag

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