Polaribacter vadi: LPB03_13085
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Entry
LPB03_13085 CDS
T04504
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pob01011
]
LPB03_13085
Enzymes [BR:
pob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LPB03_13085
Peptidoglycan biosynthesis and degradation proteins [BR:
pob01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LPB03_13085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AOW18328
UniProt:
A0A1B8TTP0
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All DBs
Position
3021781..3023091
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AA seq
436 aa
AA seq
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MKQILSVLVFSISFFSQAQKDNLPIIKKESVVITTDSIINPSKKLYFSDDDLRVIDSLLV
DEKFNSALLDTLEYVINDKDITGNFKQAVTSDLLKVRLTALNARTPFNLAYNPALEKVIN
SYLLYRSKYYPALMAKAKYYFPMFEQYLDQYDIPLEMKYLAIVESALKPRAKSWVGAAGL
WQFMYGTGKQFDLKVSSYVDERHDPVKATIAACKYLSQLFTIFGDWDLALAAYNSGPGNV
SKAIKRSGGFTNYWNIRPYLPRETAGYVPAFYATMYIFEHANEHNIYADLPRIFDFQTDT
VRVKRTVSFDQISETIGVDGEVLTDLNPSYKLDIIPFIKDRNYALRLPSNKITEFLDKET
ELYALADADDAKREKPLPKYFEMDKRIRYKVRNGDYLGKIADKFGVRVSDIKRWNGLKTS
NLKIGQRLYIYPKKIQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattttaagtgttttagtattcagtatttcattttttagccaagctcaaaaa
gataatttaccaatcataaaaaaagaatctgtagttattactacagattctattataaac
ccttcaaagaaattatatttttcagatgatgatttaagggtgattgatagtttgttggta
gatgaaaaattcaattcggctttattagatactttagaatatgtaataaatgacaaagat
attactggcaattttaaacaagcagtaacttctgatttgctaaaagttagattaacagct
ttaaatgccagaacaccttttaatttagcatacaatccagctttagagaaggtaattaat
agttatttgttgtatcgttcaaaatattaccctgctttaatggcaaaagcaaaatactat
tttccgatgtttgagcagtatttagatcagtatgatattcctttggaaatgaaatactta
gccattgtagaatctgctttaaaaccaagagcaaaatcttgggttggtgcagctggtttg
tggcaatttatgtatggaacaggaaaacaattcgatttaaaggtgagttcttatgtagat
gaaagacatgatcctgtaaaagcaaccattgcagcttgcaaatatttaagtcaattattt
acaatttttggtgattgggatttggctttagcagcttataattctggtccaggaaatgtt
tcaaaagctataaaacgttctggtggttttacaaattattggaatataagaccttattta
ccaagagaaacagctggttatgtgcctgctttttatgcaacaatgtatatttttgagcat
gcaaatgaacataatatttatgctgatcttcctagaatattcgattttcaaacagacaca
gttcgtgtaaaaagaacagttagtttcgatcaaatttctgaaactattggtgtagatgga
gaagttttaacagatttaaatccgtcttataaattagatattattccttttataaaagat
agaaattacgctttaagattgccaagcaataaaattaccgaatttttagataaagaaaca
gaattgtatgctttagcagatgcagatgatgccaaaagagaaaaacctttgccaaaatat
tttgaaatggataaacgtattcgttacaaagttagaaatggcgattatttaggcaaaatt
gctgataaattcggagttagagttagcgatattaaacgttggaatggattaaaaacgagt
aacctaaaaatagggcagaggttgtatatttatcccaaaaaaatacaataa
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