Polaribacter vadi: LPB03_13720
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Entry
LPB03_13720 CDS
T04504
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pob
Polaribacter vadi
Pathway
pob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB03_13720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pob03019
]
LPB03_13720
03110 Chaperones and folding catalysts [BR:
pob03110
]
LPB03_13720
03029 Mitochondrial biogenesis [BR:
pob03029
]
LPB03_13720
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pob04147
]
LPB03_13720
Enzymes [BR:
pob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LPB03_13720
Messenger RNA biogenesis [BR:
pob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LPB03_13720
Chaperones and folding catalysts [BR:
pob03110
]
Heat shock proteins
HSP60 / Chaperonin
LPB03_13720
Mitochondrial biogenesis [BR:
pob03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LPB03_13720
Exosome [BR:
pob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LPB03_13720
Exosomal proteins of other body fluids (saliva and urine)
LPB03_13720
Exosomal proteins of breast cancer cells
LPB03_13720
Exosomal proteins of colorectal cancer cells
LPB03_13720
Exosomal proteins of bladder cancer cells
LPB03_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
AOW18447
UniProt:
A0A1B8TP68
LinkDB
All DBs
Position
complement(3169489..3171123)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVSVAKEIE
LADPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVAAIIADLEKQAQKVGNSSEKIKQVAAISANNDDVIGDLIATAFAKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTDADKMIADLENPYVLLFDKKISNLQEILPILEPV
SQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENATLDLLGTAEGITIDKDNTTIVNGSGNPEAIKTRVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFV
RAKKVLEKLATENLDETTGVQIVNKAIEAPLRTIVENAGGEGSVVINKVLEGKKNFGYDA
KSEQYVDMLEAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEENAGGGMPPMGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatatagaagctagagatggcttaaaacgtggagttgat
gcgcttgcaaatgcagtaaaagtaactttaggacctaaaggaagaaatgtaattatttct
aaatcttttggagcaccaacagttactaaagatggtgtttctgtagcaaaagaaattgag
ctagcagatcctttagaaaacatgggagcacaaatggtaaaagaagtagcgtctaaaacc
aacgatttagctggagatggaactacaactgcaactgtgttagcacaagcaattgtaaaa
gaaggtttaaaaaacgttgctgctggcgcaaatccaatggatttaaaacgtggaattgac
aaagctgtagctgcaattattgcagatttagaaaagcaagctcaaaaggttggtaactca
tcagaaaaaataaaacaagttgctgcaatttctgcaaataacgatgatgttattggagat
ttaattgcaactgcttttgcaaaagttggtaaagaaggtgtaattactgttgaagaggca
aaaggtatggaaacatacgtagatgttgtagaaggtatgcagtttgatagaggttattta
tctccttactttgtaactgatgcagataaaatgattgcagatttagaaaatccgtatgtt
ttattgttcgataaaaagatttctaacttacaagaaattcttccaattttagaaccagtt
tctcaatcaggaagacctttattaattattgctgaagatgtagatggacaagctttagct
actttagtcgttaataaattacgtggtggattaaaaattgctgctgtaaaagctcctggt
tttggagacagaagaaaagcaatgttagaggatatcgctattttaactggtggaactgta
atttctgaagaaagaggtttttctcttgaaaacgcaacgttagatttattaggaactgca
gaaggaattacaattgacaaagacaatactacaattgtaaatggttctggaaatcctgaa
gcgattaaaactagagtaaatcagatcaaagcgcaaatagaaacaactacttctgattac
gataaagaaaaacttcaagaacgcttggctaaattagctggtggtgttgcagttttatat
gttggtgctgcttctgaagtagaaatgaaagagaaaaaagatagagttgatgatgcttta
catgctacaagagctgcagttgaagaaggtattgttgctggtggtggagttgcatttgta
cgtgctaagaaagttttagagaaattagctactgaaaatttagacgaaactacaggtgta
caaattgtaaacaaagcaattgaagcgcctttaagaacgattgtagaaaatgctggtggt
gaaggttctgttgtaatcaacaaagttttagaaggtaaaaagaactttggttatgatgca
aaatctgaacaatatgtagatatgttagaagctggaattatagatcctaaaaaagtaact
agagttgctttagaaaatgcagcttctgttgcaggaatgattttaactacagaatgtgct
ttgatagatattaaagaagaaaacgctggtggtggaatgcctccaatgggtggtggaatg
ccaggtatgatgtaa
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