Polaribacter vadi: LPB03_14760
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Entry
LPB03_14760 CDS
T04504
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pob
Polaribacter vadi
Pathway
pob03030
DNA replication
pob03430
Mismatch repair
pob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB03_14760
03430 Mismatch repair
LPB03_14760
03440 Homologous recombination
LPB03_14760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pob03032
]
LPB03_14760
03400 DNA repair and recombination proteins [BR:
pob03400
]
LPB03_14760
Enzymes [BR:
pob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB03_14760
DNA replication proteins [BR:
pob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB03_14760
DNA repair and recombination proteins [BR:
pob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB03_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Menorin
HHH_3
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AOW18640
UniProt:
A0A1B8TQN8
LinkDB
All DBs
Position
complement(3420326..3424666)
Genome browser
AA seq
1446 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCVQIAWQLHDEMGNVLEHNDFLIQPEGYNIPF
DAERIHGISTELAAQEGIDLEKGLHLFNEALSKTKFIVGQNLQFDLNIMGCEFHRLGVET
PLAKLPILDTCTEKTATLCQIPGGRGGKFKLPTLTELHKHLFGTDFNEAHNATADVEATT
RCFLELIRIREYTKEQLDVDADYFKNFSEANPKPIQLIGLKHINLKKESDKIRKRLEKLK
DVKETISTSEGLAELKDVQFSHLHNHTQFSVLQSTMQIANIVAAAAKDNQPAVAMTDTAN
MMASFHFVSAILNHNKTAATPMKPIVGCEFNVCEDHKNKSVKDNGYQVVLLAKNKKGYHN
LAKMSSTAFVDGFYYVPRIDREIIKKYKEDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEEFKDDFYIELMRHNQQDENIVNETLLKFSKNHDVKIVATNNTFYLEKKDANAHDILL
CVKDGEKQATPKGKGRGYRYGLPNEEYYFKSTEEMKTLFADLPEAISNIQEIVDKIEIFT
LARDVLLPAFDIPEEFVYEEDKIDGGKRGENEFLKHLTFVGAKKRYGEITESIKERLDFE
LSVIEKTGYPGYFLIVEDFIREARNMDVAVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDAKSKGKVAGLRAEEKQLVEELRHMSFGNDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITNYVPVALAKDSDMYVTQFDNSVVESAGLLK
MDFLGLKTLTLIKDTVKIVKAKHDVVLDPETFPLDDVKTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLANFTKGEADVLRKAMGKKQIAVLDKMKPKFIEQAGKNGHDEKSLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMNDIKAVSFFMEEC
KRMGLAVLGPDLNESFLKFSVNAEGAVRFGMAAVKGVGAAAVRAIIKEREENGHYSSIFD
LAKRVDLRAANKKSFDSLIKAGAFDSFTDTHRAQYFATDEKGLTFLERAMKFGSKYQENE
NSAQVSMFGEASTVQFPEPDIPECETWGTMELLSQEKEVIGIYISAHPLDDFKNEMIFCN
ASLKYFKGDLAKYVGMNLAFAGIITDVQHRVSKAGKGWAMFIIEDYGDSNEFRIFGEDYL
RMKHFLVPNSFLFVRSTIQPGWTNKETGVAGEPRLKFTEMKLLHDIMDELCKKITIKIQL
DDIKENTILNLETILKNNPGKQSLNFTVWDAKEKIEVSLPSRNTKINVSNELLATLESQQ
IDFKLN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacaggtttacctaaaagttggaatgctccaatt
acagatacagacaattggccaaggtgtgtgcaaattgcttggcaactgcatgatgaaatg
ggaaatgttttagaacataacgatttcttaatacaaccagaaggctataacattcctttt
gatgctgaaagaattcatggaatttcaacagaattagcagcacaagaaggtatcgattta
gaaaaaggattgcatctttttaatgaagccttatctaaaacaaaatttatagttggtcag
aatttacaattcgaccttaatattatgggttgtgagttccatagattaggtgttgaaact
cctttagctaaacttcctattttagatacgtgtacagaaaaaacggctacattatgccag
attcctggaggaagaggaggtaaatttaaattaccaacattaacagaattacacaaacat
ctatttggtaccgattttaatgaagctcataatgcaacagcagatgtggaagctactact
cgttgttttttagaattgattcgtattcgagaatacactaaagaacagttagatgttgat
gcagattattttaaaaatttctcggaagcaaatccaaaaccaattcaattaattggctta
aaacacatcaaccttaaaaaggaaagtgataagattcgaaaacgtttagagaaattaaaa
gacgttaaagaaactatttctacttctgaaggtttagctgaattaaaagatgttcagttt
tcgcatttacacaaccatacacagttttcggttttgcaatctaccatgcaaattgccaat
attgtagcagctgctgctaaagataatcagccagctgttgctatgacagacactgcaaac
atgatggcttcttttcattttgtgagtgctattttaaatcacaataaaactgcagcaact
ccaatgaaaccaattgttggttgtgagtttaatgtgtgtgaagatcataaaaacaagtct
gtaaaagataatggatatcaagttgttttactcgcgaaaaacaaaaaaggatatcataat
ttggcaaaaatgtcttccacagcttttgttgatggtttttattatgtacccagaattgat
agagaaatcatcaaaaaatataaagaagatattattgttttaactggaaatttgtatggt
gaagttcctagtaaaattttaaatctgggagaaaaacaagctgaagaagctttgctttgg
tggaaagaagaatttaaagacgatttttatattgagttgatgcgtcataatcagcaagat
gaaaacatcgtgaatgaaactttgttgaagttttctaaaaatcacgacgttaaaattgta
gctaccaataatactttttatttagagaaaaaagatgcaaatgcacatgatattttattg
tgtgtaaaagatggcgaaaaacaagcgactccaaaaggaaaaggtcgtggttataggtat
ggtttgccaaatgaagagtactatttcaaatctactgaagaaatgaaaacgctttttgca
gacttgccagaagcgattagtaatattcaagaaattgtcgataaaattgaaattttcacc
ttagcaagagacgttttattacctgcttttgatattccagaagagtttgtatatgaagaa
gataaaattgatggtggaaaacgtggagaaaacgaattcttaaaacacttaacttttgtt
ggcgccaaaaaacgttatggagaaattacagaatctattaaagaacgtttagattttgaa
ttatccgtcattgaaaaaacaggatatcctggttattttttaattgttgaagattttatt
agagaagccagaaatatggatgttgctgtaggccctggacgtggttctgctgctggttct
gtggttgcttactgtctttggattaccaatatagatcctattaaatacgatttacttttt
gagcgtttcttaaatcctgaaagggtttccatgccagatatcgatattgattttgatgat
gaaggtcgtggaagagttatggattatgtaattgataaatatggtgcaaatcaagtggcg
cagattattacttatggaactatggctgcaaaatcatctattagagatacagccagagtt
ttagatttaccactttttgaagctgatagaattgcgaaattaattccaggcatcaaacta
aaaaacatttttggtgatgatgcaaaaagtaagggaaaagttgctggtttacgtgcagaa
gaaaaacaacttgttgaagaattaagacacatgtcttttggaaacgatttggtttctgaa
acgattaataaagctacaattttagaaggttctgttagaaatacaggaattcatgcttgt
ggtgtaattattacgcctggagatattacaaactatgttcctgttgctttggcaaaggat
tctgatatgtatgtaacccaatttgacaactctgtagtggaatctgctggtttgttaaaa
atggatttcttggggttaaaaacgctgactttaattaaagacaccgtaaaaattgtaaag
gccaaacatgatgtagtattagatccagaaacttttcctttagatgatgtaaaaacatac
gagttattccaaagaggagaaactgttggtatttttcaatatgaatctccaggaatgcaa
aaacacatgcgttctttaaaaccgaccgtttttgcagatttaattgccatgaatgccttg
tacagacctggacctatggaatatattccgagttttatcaatagaaaacacggaacagaa
gatattgaatacgatttaccagccatggaagagtatttggctgaaacgtatggaattaca
gtatatcaagagcaagtaatgctactttcgcaaaaattggcaaatttcaccaaaggtgaa
gccgatgttttaagaaaagcgatgggtaaaaagcaaattgcggttttagataaaatgaaa
ccaaaatttattgaacaagcaggaaaaaacggacatgatgaaaaaagtttagagaaaatc
tggaaagactgggaagcctttgcaagttatgcttttaacaaatctcactctacttgttat
gcttggattgcgtatcaaactgcctatttaaaagcacattatcctgcagaatatatggct
tctgtactttctaataatatgaatgatattaaagctgtttccttttttatggaggaatgt
aaacgaatgggattagcagttttaggtccagatttaaatgaatctttcttaaagttttct
gtaaatgcagaaggtgctgttcgttttggaatggcagctgttaaaggagttggtgctgca
gctgttagagctatcattaaagaaagagaagaaaatggtcattattcatcgatttttgat
ttagcaaaacgtgtagatttaagagcagctaacaaaaaatcttttgatagtttaattaaa
gcaggagctttcgattcttttacagatacacatagagctcaatattttgccactgatgaa
aaaggattaacctttttagaacgtgctatgaaattcggaagtaaatatcaagaaaacgaa
aattctgcacaagtttctatgtttggagaagcatcaacagtgcaatttccagaacccgat
attcctgaatgtgaaacttggggaactatggagcttttatcgcaagaaaaagaagtaatt
ggtatttatatttctgctcatcctttagatgattttaaaaatgaaatgattttttgcaat
gcgtctttaaaatattttaaaggtgatctcgcaaaatatgtgggcatgaatttggctttt
gcaggaatcataactgatgtacaacacagagtatctaaagcaggaaaaggctgggcaatg
tttataattgaagattatggagacagcaacgaatttaggatttttggagaagactattta
agaatgaaacactttttagtgccaaattcattcttatttgtgcgttctacaattcaacct
ggctggacaaataaagaaacaggtgttgctggagaaccaagattaaagtttacagaaatg
aaactgttacatgatattatggatgaactttgtaaaaaaatcaccataaaaattcagtta
gatgatattaaagaaaacaccatcttaaatttagaaactattttaaaaaacaatccaggt
aaacaatctttaaactttacagtttgggatgccaaggaaaaaattgaagtaagtttacca
agcagaaacacaaaaattaatgtttctaatgaattgttggcaactttagagagtcagcag
atagattttaagttgaattaa
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