Polaribacter vadi: LPB03_15095
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Entry
LPB03_15095 CDS
T04504
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pob
Polaribacter vadi
Pathway
pob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB03_15095
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pob01007
]
LPB03_15095
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pob03016
]
LPB03_15095
03029 Mitochondrial biogenesis [BR:
pob03029
]
LPB03_15095
Enzymes [BR:
pob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LPB03_15095
Amino acid related enzymes [BR:
pob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LPB03_15095
Transfer RNA biogenesis [BR:
pob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LPB03_15095
Prokaryotic type
Other AARSs
LPB03_15095
Mitochondrial biogenesis [BR:
pob03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LPB03_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2b
tRNA-synt_2d
DUF4923
Motif
Other DBs
NCBI-ProteinID:
AOW18699
UniProt:
A0A1B8TQL2
LinkDB
All DBs
Position
3496993..3500325
Genome browser
AA seq
1110 aa
AA seq
DB search
MELEKLNDLLKKHELELVIGLETHVRLNTKSKLFCSCANQEIEQPNTNICSVCTGQMGVL
PSLNKEAITKAIYFGKAVKSTFKNEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGQVSC
FRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCIRNIEDASTY
AQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKHTYNLNPRTEIKNLNSFKFMVEALKE
EIEKQLTYYIDHKEFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDLPFVNIKNVV
ESIDVDISSLPFAVESILIKGGVLPQDAKFFTADSLRSETFVAINNVIKDPSFVAKTLVN
NIGADEYAAIHDVNHLIEIFQLFKAEKITAVLVQNAIINYLKDRKFDYNRYFEENTISDE
KIKLAVLKVIAENEAIANDIKAGNQGKAGILVGKVIGIIGKGASGKVIRQEILDAVSDSS
LAVSEKPNAKSQSQKATSEKPKKEEELQTVPIIIKDEYRTHKISDLSEKIIKDKVTLAGW
VSSVRDHGELIFIDLRDSSTEIFQVRLSRETFPNLDELVKLKPETVIMVTGIVVQRNEDD
YNAGLRTGKLELETSALEILNLSKTLPFEIKRAMKTNETTRFQYKFLDHRNDEVRKAIVN
RHKVIKLLRDILDEEEFLEIETPILTAGTDEGAREFIVPTRKQAGSFYTLPQAPQQFKQM
LMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFNEVVKNIY
GKKWILHPFEVITYKNAMDKYGCDRPDLRFGLQMQDITGIVKETTFQVFSKPIEEGGIVK
CIKVSAKEQGKNRMSKGQIENLTAIAQQNGLGGLAYIIVNENDLQSPIIKFLGEEIAANI
IKATNAQIGDIVFFSAADYATANKALDAVRQEMGKILKLINPKELRPAWVVDFPMFEKTE
EGRWTFTHNPFSMPAIYDLEKHMNNKDAEIGEIIAQQYDLILNGYEIGGGSVRAHKAEIL
EATYKNMGYNKEEMMKSVGTMYKAFQYGAPPHGGIAWGIDRLMMILEKKASIREVMAFPK
TGSSEDLLFNAPSILSDKKVEEMNVRIIRK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagctagagaaattaaatgacttactaaaaaaacatgagttagaactcgtaattggt
ttagaaacacacgttcgtttaaacacaaaatcgaagttgttttgttcttgtgcaaatcaa
gaaatagaacagccaaacaccaatatatgttcagtttgtactgggcaaatgggtgtttta
ccatctttgaataaagaagcaattaccaaagctatctattttggaaaagcagtaaaatct
acttttaaaaacgaggttatttcttgggatcgtaaacattacgaatatccagataatcca
aaaaatattcaaattacacagtttcataatcctgtaattcctgatggacaagtttcgtgt
tttaggaacgatgggagtcaatttactgtgaatttaacgcaagttcatatagaggaagat
gctgcaaaattgatgcacgaaaagaaaatttctttagtcgattttaacaaagcaggagtt
cctttaattgagattgttacagagccttgtatcagaaatattgaagatgcatccacctac
gcacaatatattcagagaattgttcagaatttaaaaatatctgaagcaaatcttgaaaaa
ggggaatttaaaagtgatgtttctgtttctcttcgaaaaaaacatacgtataatttaaac
ccgagaacagaaatcaaaaacttgaattcgtttaagtttatggtggaagctttaaaggag
gaaatcgaaaagcaacttacctattatatagaccataaggaatttagaccagaccaaaca
acagttttgtgggatgctgatttaaagcaaactaaaaccatgcgtaaaaaggaatttgaa
gctgattacagatttatttctgaaccagatttgccttttgtaaacattaaaaatgtagtt
gaaagtattgatgttgatatcagttctttgccttttgctgtagaatctattttgataaaa
ggtggagttttgcctcaagatgctaaattttttactgcagattcgcttcgttctgaaact
tttgtagccattaataatgtgattaaagatccatcttttgttgccaaaacattggtgaat
aatattggtgcagatgaatatgcagctattcacgatgtaaatcatttaattgaaattttt
caattgtttaaagcagaaaaaattacggctgttttagttcaaaatgcaattatcaattat
ttaaaagatagaaagtttgattataacaggtattttgaagaaaacacaatttctgatgaa
aaaataaagctagctgttttaaaagtaattgcagaaaatgaagcaattgcaaatgatatt
aaagcaggaaatcaaggaaaagcaggaattcttgttggtaaagttattggaataattggg
aaaggtgcttctggaaaagtaattcgtcaggaaattttagacgcagttagcgattcgtct
ttagcagttagcgaaaaaccaaatgcaaaaagtcaatcgcaaaaagctactagcgaaaag
ccaaaaaaagaagaagaactacaaacagttccaatcattataaaagatgaatatagaact
cataaaatatctgatttatcagaaaaaataattaaagataaagtaactttagctggttgg
gtttctagtgttagagatcatggagaattaatttttatagatttacgtgattcgagtaca
gaaatttttcaagttcgtttaagcagagaaacatttcctaatttagatgaattggtaaaa
ttaaagccagaaactgtaattatggttactggaattgtggttcaaagaaatgaagatgat
tataatgcaggtttaagaactggtaaattagagttagaaacatctgctttagaaatttta
aatttatcgaaaacattgccttttgaaataaaaagagccatgaaaacgaatgaaactact
cgttttcaatacaagtttttagatcatagaaatgatgaagttcgcaaggcaattgtaaat
cgtcataaagtaataaaattacttagagatattttagatgaagaagagtttttagaaatt
gaaactccgattttaactgcaggaacagatgaaggtgcaagagaatttattgtaccaacc
agaaagcaagcaggttcattttatacattaccacaagcgcctcaacagtttaaacaaatg
ttgatggttggtggttttgagaaatatttccaaattgcacgttgttttagagatgaagat
tctagaggagatagacagccagaatttacacaattagatattgaaatggcatatgcaagt
atgcagcagattatcgatttaaacacaaaaatgtttaatgaagttgtgaaaaatatttat
ggtaaaaaatggattttacatccttttgaagtaattacttataaaaatgcgatggataaa
tatggttgtgatcgaccagatttacgttttggtttgcaaatgcaagacattacaggaatt
gtaaaagaaactacttttcaagtttttagcaaacctattgaagaaggaggaattgtaaaa
tgtattaaagtttctgccaaagaacaaggtaaaaacagaatgtctaaaggacagattgag
aatttaactgccatcgctcaacaaaatggtttaggtggtttggcatatattattgtaaat
gaaaacgatttacaatcgccaattattaaatttttaggtgaagaaattgcagcaaatatt
atcaaagctacgaatgctcaaattggtgatatcgtgtttttctctgctgcagattatgca
actgcaaacaaagctttagatgctgttcgtcaagaaatgggaaaaatcttaaagttgata
aatccgaaggaattaagacctgcttgggttgtagatttcccaatgtttgaaaaaacagaa
gaaggaagatggacgtttacacacaatcctttttcgatgccagcaatttacgatttggaa
aaacacatgaataataaagatgctgaaattggcgaaattattgcgcaacaatatgattta
attttgaatggttacgaaattggtggaggttcagttagagcacataaagcagaaatttta
gaagcaacctataaaaatatgggttataataaagaggaaatgatgaaaagtgttggaacc
atgtataaagcgtttcaatatggagcaccacctcatggaggaattgcttggggaattgac
agattaatgatgattctagaaaagaaagcatcaattagagaagtaatggctttcccaaaa
actggctcttctgaagatttgttatttaatgcaccttctattttatcagataaaaaagtg
gaagaaatgaatgttaggattattaggaaatag
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