Polaribacter vadi: LPB03_16215
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Entry
LPB03_16215 CDS
T04504
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pob
Polaribacter vadi
Brite
KEGG Orthology (KO) [BR:
pob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pob03009
]
LPB03_16215
Enzymes [BR:
pob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LPB03_16215
Ribosome biogenesis [BR:
pob03009
]
Prokaryotic type
ribosomal protein modification factors
LPB03_16215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
TRAM
Motif
Other DBs
NCBI-ProteinID:
AOW18901
UniProt:
A0A1B8TNZ5
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All DBs
Position
3746738..3748093
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AA seq
451 aa
AA seq
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MRTKTIKQNKINVVTLGCSKNIYDSEVLMGQLKANGKNVVHEDENDDGNIVVINTCGFIG
KAKEESIDTILHYAQRKEAGEIDKVFVSGCLSERYKPDLEREIPNVDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHRSTPIEDIVIEAT
KLAEKGIKEIMLIAQDLTYYGLDIYKKRALAQLLEALAKVEGIEWIRMHYAFPTGFPMDV
LDVMKREPKVCNYLDIPLQHINTELLKSMKRGTTHEKTTALIHKFREAVPEMAIRTTLIV
GYPGETEEMFQELKDWVEEMRFERLGAFEYSHEENTGAYVLEDDVPAEVKFKRVNEIMEV
QSQISWELNQQKIGKTFKCLFDRKDGEYFYGRTESDSPDVDNDVLVDAKEHYIKIGEFID
VKIHEAGDYDLYGTPVKKQEKPVPLHQKKSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaaaccatcaaacaaaataagattaacgttgtaactttagggtgctcaaaa
aacatttacgatagtgaggttttaatggggcaattaaaagccaatggaaaaaatgtggtg
cacgaagatgaaaatgatgatggaaatattgtcgtgattaatacttgtggctttataggt
aaagcaaaagaggaatctattgatactattttgcattatgcacaaagaaaagaagctggt
gaaattgataaagtttttgtttctggttgtttaagtgaacgttataaaccagatttagaa
agagaaattccaaatgtagatcaatattttgggacacacgatttaccaaatttattaaaa
gttttagaagcagattataaacacgaattaattggagaacgtttaacaaccactccaaaa
cattatgcatacttaaaaattgcagaaggttgtgatagaccttgttctttttgcgcaatt
cctttaatgcgtggaaaacatagatctacacccattgaagatattgttatagaagcaaca
aaattagcagaaaaaggtattaaagaaattatgctaattgcgcaagatttaacgtattat
ggtttagatatctacaaaaaaagagctttagcacaattattagaagcgttggcaaaagta
gagggaattgaatggattagaatgcattatgcgtttccaactggtttcccaatggatgtt
ttagatgtcatgaaacgtgagccaaaagtgtgtaattacttagatattcctttacaacat
atcaatactgagttgctaaagtcgatgaaaagaggaacaacacacgaaaaaacaacggct
ttaattcataaatttagagaagctgtgccagaaatggcaattagaaccacgttaattgtt
ggttatccaggagaaacagaagaaatgtttcaagaattaaaagattgggtagaggaaatg
cgttttgaaagattgggtgcttttgaatattctcatgaagaaaatacaggtgcctatgtt
ttagaagatgatgtgcctgcagaagtaaagtttaaaagagttaatgaaattatggaagtt
cagtctcaaatttcttgggaattgaatcaacaaaaaataggaaaaacttttaaatgttta
tttgatagaaaagatggcgaatatttttatggacgtacagaatctgattcaccagatgtt
gataacgatgttttggtagatgctaaagagcattatattaaaatcggtgaatttatagat
gtaaaaattcacgaagctggagattatgatttatatggaactcctgttaaaaaacaagaa
aagccagttcctttgcatcagaaaaaaagcaaataa
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