Segatella oris: NCTC13071_00439
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Entry
NCTC13071_00439 CDS
T06067
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
poc
Segatella oris
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poc03032
]
NCTC13071_00439 (topA)
03400 DNA repair and recombination proteins [BR:
poc03400
]
NCTC13071_00439 (topA)
Enzymes [BR:
poc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13071_00439 (topA)
DNA replication proteins [BR:
poc03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13071_00439 (topA)
DNA repair and recombination proteins [BR:
poc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13071_00439 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF5800
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
VEH14462
UniProt:
A0A3S4X5M6
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All DBs
Position
1:complement(502993..505320)
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AA seq
775 aa
AA seq
DB search
MQENLVIVESPAKAKTIEKFLGEDYKVMSSYGHIRDLKKKELSIDPKTLEPDYEIPDEKK
KLVSELKSNAKKAKKIWLASDEDREGEAISWHLCEVLGLDEAKTNRIVFHEITKSAILDA
IKSPRHLNMDLVNAQQARRVLDRLVGFKLSPVLWRKVKPALSAGRVQSVAVRLIVERERE
IQAFHSEPYYRVNALFGITNADGSQSEVKAELDTRFKTHGEAVAFLEQCKDAKFTVSNIT
KKPLRRTPAPPFTTSTLQQEAARKLGFTVSQTMMVAQRLYESGRITYMRTDSVNLSSLAI
NTSKDEIIKLWGKEYSKTRNYHTHAKGAQEAHEAIRPTFMSQTEIDGTAQEKRLYELIWK
RTAASQMADALIDKTTVTIDIAGSQAKFIANGEVVTFDGFLKVYRESTDEDDNNQEEATH
MLPVMQVGNVLERREITSTERFSMGPIRYTEASLVHKLEELGIGRPSTYAPTISTIQQRE
YVQKGDKKGEERTYTVDTLKGTKVTSRERKEMVGSEKGKLLPTDIGIVVNDFLMANFPDI
MDYNFTAKVEQQFDRIAEGKEEWNTMMKVFDKSFEPTVDKVMNARSEHKAGERQLGKEPE
TGKPVFVKIGRFGPVVQIGSADDTEKPRFSQLPSDKSIETITLEEALELFKLPRTIGEFE
GSDVVIGAGRFGPYVMHNKKYVSLPKGTDPMKVTLEEAIQLIGEKREQEQKRHIKAFDED
AKLEVLNGRYGPYIAYDGKNYRMPKALHEKAAELSYAECMEIVNNAPEPKGRKRK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaatttagttatcgtagaaagcccggcaaaggccaaaactattgagaagttt
ctgggcgaggactacaaagtgatgtcatcatacggacacattcgtgacctgaagaaaaag
gaactgagtattgatccaaagactttggaaccggattatgagattcctgacgagaagaaa
aaactggtttctgaactcaagtcgaatgccaagaaagcgaaaaagatatggttggcttcc
gatgaagaccgcgagggagaagctatttcatggcacctttgcgaggtgttggggcttgat
gaggcaaagacaaaccgcattgtgttccatgaaatcacgaaatctgccattcttgatgct
atcaaatcaccccgtcatttgaatatggatttggtgaatgctcagcaggcacgacgcgtt
ctcgaccgtttagtcggctttaaactttcccctgttttatggcgtaaagtgaagcccgcg
ttgagcgcaggtcgcgtacaaagcgtggctgtcagactcattgttgaacgcgaacgcgag
atacaagctttccatagcgaaccttattaccgtgtcaatgcactgttcggcatcaccaat
gctgacggaagtcagagcgaagtaaaggccgaattggacactcgtttcaagactcatgga
gaggctgttgcctttcttgagcagtgcaaggatgccaaattcaccgtaagtaacattaca
aagaagccgcttcgccgcacacctgcgcctccttttaccacctctacactgcagcaagag
gctgcaaggaagttggggttcaccgtcagccagacgatgatggtggcgcaacgcctttat
gaaagcggccgtatcacctacatgcgaaccgactctgtgaacctttcttcattggcaatc
aacaccagcaaggatgagattatcaagctttggggcaaggaatacagcaaaacccgcaac
tatcacacgcatgcaaagggtgcacaggaagcgcatgaagctatccgtccgacctttatg
agccaaacagagattgacggaacagcacaggagaagcggctttatgaactgatatggaag
cgaacagcagccagtcagatggctgatgcgctgattgacaagaccacggtaaccatagat
atcgccggcagtcaggccaagttcattgccaacggtgaggtagttaccttcgatggcttc
ctgaaagtgtaccgcgaatcaaccgatgaagacgacaacaaccaggaagaagctacgcac
atgctgccggtaatgcaggtgggtaatgtgcttgaacgccgcgaaatcacttccacagaa
cgcttcagcatgggtccaatccgctacacggaagccagtttggtacataaactcgaagaa
ttgggcatcggacgtccgtcaacctatgctccaactatatcgacgatacagcaacgtgag
tatgttcagaagggcgataaaaagggagaagagcgcacatatactgtcgatacgctgaaa
ggaacgaaagtaacgagccgcgaacgcaaggagatggtgggcagtgaaaagggaaaactg
ctgccaacggatatcggaatagtcgtcaatgactttctgatggccaacttccctgatatc
atggactacaactttacagccaaagtagagcagcagttcgaccggattgccgaaggaaaa
gaggagtggaacacgatgatgaaagtcttcgacaagagctttgagcctacggttgacaag
gtgatgaacgcccgttcggagcacaaagcaggcgaacgacaactcggaaaagagcccgag
acaggcaaacctgtgtttgttaagatcggaagatttggcccggtagttcagattgggtct
gcagatgacacggaaaaaccgcgcttttcacagctcccgagcgacaaaagcattgagaca
ataacgctcgaagaggccttggaactattcaaactgccgcgcactatcggcgaatttgaa
ggcagcgacgtagtaatcggtgccggacgctttggtccttacgtgatgcataacaagaaa
tatgtgtctctccccaagggaactgaccccatgaaagtaacacttgaagaggccattcaa
ctcattggagaaaagcgcgaacaggaacagaagcgacatatcaaggctttcgacgaggac
gctaaactcgaagtgctcaacggtcgctatggcccttacatcgcatatgacggtaagaac
taccgcatgccaaaggctttacacgagaaagcagccgaactgagctacgcagaatgtatg
gaaatcgtgaacaatgcacccgaaccgaaaggtaggaaaaggaagtaa
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