Segatella oris: NCTC13071_00516
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Entry
NCTC13071_00516 CDS
T06067
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
poc
Segatella oris
Pathway
poc03030
DNA replication
poc03410
Base excision repair
poc03420
Nucleotide excision repair
poc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13071_00516 (polA)
03410 Base excision repair
NCTC13071_00516 (polA)
03420 Nucleotide excision repair
NCTC13071_00516 (polA)
03440 Homologous recombination
NCTC13071_00516 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poc03032
]
NCTC13071_00516 (polA)
03400 DNA repair and recombination proteins [BR:
poc03400
]
NCTC13071_00516 (polA)
Enzymes [BR:
poc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13071_00516 (polA)
DNA replication proteins [BR:
poc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13071_00516 (polA)
DNA repair and recombination proteins [BR:
poc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC13071_00516 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13071_00516 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
VEH14539
UniProt:
A0A448L3L1
LinkDB
All DBs
Position
1:607519..610281
Genome browser
AA seq
920 aa
AA seq
DB search
MNKLFLLDAYALIFRSYYALIRAPRINSKGLNTSAILGFVNTLNEIITKEKPTYIGVAFD
LGKTFRHEAFPPYKAQRQETPEDITLSVPFIKDILRAFHIPILQVEGFEADDVIGTLATK
AGKEGIATYMLTPDKDYGQLIRENVFMYRPRHGGGYDIIGEQEIAEKYGISTPAQVIDLL
ALMGDSADNFPGCPGVGEKTAVKLINEFGSIDELISHTDKLKGKMREKVEGAIEDIKMSK
FLATIRTDVPVELNLDELQLQAPDEQKLSEIFAELEFKSLANKILNKTEQKQKSVNSELD
LFAVNPHESQVASENASFESLKTIKHDYQLIENQEEAHRICDFFRTKRILSLDTETTSTN
AIDAELVGLCFAVEEHKAFYVAIPNDREEALQYVNIFKPVYEDPSILKIGQNLKYDYEVL
KNYGVTLGGKMFDTMLAHYVIQPELHHNMDYMAETLLHYKTIHIDELIGPRGKHQKSMRD
LDPKDVYEYAAEDADITLQLKNVLEPKLKETGTEDLFWNIEMPLVPVLADMELNGVRLDT
DALHDTSMIFTERMNRLEQQIYEKAGETFNISSPKQVGDILFGKMQIMEKPKKTKTGQYV
TSEEVLQSLRAKHPIVADILDYRGLKKLLGTYVEALPKLINKRTGHIHTSFNQALTATGR
LSSSDPNLQNIPVRSEDGKEIRKCFVPEQDCMFFSADYSQIELRIMAHLSGDENMIEAFR
QGFDIHAATAAKIWHKDIADVTSEERKKAKQANFGIIYGITTYGLAQRMEIDNREARELI
EGYFATFPKVRAYMEQAKEEARRKGYAETFFGRRRYLPDITSKNGTVRGFAERNAINAPI
QGSEADIIKIAMIRIWQRFKAENIRSKMILQVHDELNFSVYPDEKERVEKIVLEEMQGAY
QLQVPLIADAGWGKNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattatttctcttagacgcttacgcgttgatattcaggtcgtattacgctctt
atccgtgctccgcgcatcaattccaagggcttaaacacttcggctatcctcgggtttgtc
aataccctcaatgaaattatcacgaaagaaaaacctacttatataggtgttgctttcgat
cttggcaagactttccgtcatgaagccttcccaccctacaaggctcaacgtcaggaaaca
cccgaggatatcacgctcagcgtgcctttcatcaaggatatcctgcgcgctttccatatt
cctatccttcaggttgaaggctttgaagccgatgatgtcatcgggacattggccacaaaa
gccggcaaggagggcatcgcaacctatatgctcacgcccgataaagactacggtcaactc
atccgagagaatgttttcatgtatcgcccgcgccatggtggtggctatgacatcatcggt
gaacaggagattgcagagaaatatggcatctctaccccagcccaggttatcgacttgctg
gctttaatgggcgactcggccgacaatttccctggttgtccgggggtcggagagaagact
gcggtgaaacttatcaatgagtttggttccatcgatgaactcatttcacacactgacaag
ctgaaaggtaaaatgcgcgaaaaggtggaaggcgccatcgaagatatcaagatgtcgaag
tttctcgcaactatccggacagatgttcccgttgaactcaatcttgacgaattgcaactt
caagcaccagatgagcagaaactgagtgaaatcttcgccgagttagaatttaagtcgctt
gcaaataagatcttaaataaaacagaacaaaagcaaaaatcagttaattcagagctcgat
ttatttgctgtaaatccgcacgagagtcaagttgcttcagaaaacgcgagttttgagagc
cttaaaaccattaaacacgactatcaactgattgaaaatcaagaagaagcacatagaatt
tgtgactttttcaggacaaaacgaattctcagtttagatacagagacgacctcaaccaat
gcaattgatgccgaattggtaggcttatgcttcgctgtcgaggaacacaaagcgttttat
gttgcaattcctaacgaccgtgaagaagccttgcaatatgttaacatcttcaaacctgtc
tatgaagatccgtcaatcttgaagattggacaaaacttgaagtatgactatgaggtgctg
aaaaactacggagtgaccctcggaggcaaaatgtttgatacgatgttggcccattatgtc
attcaacccgagttgcatcacaacatggattacatggccgagacactactccactacaag
acaatccatatcgatgaactcattgggccacgcggaaagcatcagaagtcgatgcgcgat
cttgacccgaaagacgtgtatgagtatgccgctgaagacgcagacatcacgcttcagctt
aaaaacgtgctcgaacccaagctgaaagagaccggaactgaagacctcttctggaacatt
gagatgccactcgtacccgtacttgccgatatggaactgaatggcgtgcgtttagatacc
gatgcactccatgatacctcgatgatatttacagagagaatgaaccgccttgagcaacag
atttatgagaaagccggcgagacattcaacatctcaagcccgaaacaagtgggtgatatc
ctcttcggaaagatgcagatcatggagaaaccgaagaaaactaaaacgggacaatatgtc
acaagcgaggaagtgttgcagtcactccgtgcaaaacaccctattgttgcagacatattg
gactacagagggctaaagaaactgctcggaacctacgtggaagcactcccgaaacttatc
aacaagcgcaccggacacatacatacttcgttcaatcaagcccttaccgccaccggaaga
ctatcctcgagcgaccctaatttgcagaatattcccgtgcgaagtgaagacggaaaggaa
atcaggaaatgttttgttccagaacaagattgcatgttcttctctgccgactattctcag
attgagcttcgcatcatggctcatctcagtggtgatgagaacatgatagaggcttttcgg
cagggttttgacatccatgctgccacagctgccaagatatggcataaggatatagccgat
gtaacatcggaagaacgcaagaaagctaagcaggcaaacttcggcattatctatggaata
acgacctacggattagcacaacgcatggaaatagataacagagaagcccgcgaactcata
gaaggttatttcgccaccttccccaaagtgcgtgcttatatggagcaagccaaggaagaa
gcacgccggaaaggatatgccgaaacattcttcggacgccgccgttacctacccgatatc
acatcgaagaacggcactgtgcgcggttttgccgagcgaaatgccatcaatgcgcctata
caaggctccgaagccgatatcatcaagattgccatgatacgcatctggcagcgtttcaag
gccgaaaacatccgttcaaagatgatacttcaggtgcacgatgaacttaacttctcagtt
tatcccgatgaaaaagagcgtgtagaaaagattgttctcgaggaaatgcaaggtgcctat
caactccaagtgccactgattgccgatgcaggatggggcaaaaactggctcgaagcacat
tga
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