Segatella oris: NCTC13071_01058
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Entry
NCTC13071_01058 CDS
T06067
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
poc
Segatella oris
Pathway
poc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13071_01058 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poc03019
]
NCTC13071_01058 (recQ_2)
03400 DNA repair and recombination proteins [BR:
poc03400
]
NCTC13071_01058 (recQ_2)
Enzymes [BR:
poc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13071_01058 (recQ_2)
Messenger RNA biogenesis [BR:
poc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13071_01058 (recQ_2)
DNA repair and recombination proteins [BR:
poc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13071_01058 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF2620
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
VEH15063
UniProt:
A0A448L518
LinkDB
All DBs
Position
1:1268885..1270780
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AA seq
631 aa
AA seq
DB search
MEYRQILQQYWGYPDFRGIQENIIRSIGEGRDTLGLMPTGGGKSITFQVPALAKEGVCIV
VTPLIALMKDQVDHLLERGIKAAAIYSGMTRQEIIKTLENAVFGGLKLLYISPERLSSEL
FIAKFRHMNVSFITVDEAHCISQWGYDFRPSYLHIAEIRKLKPEVPVLALTATATLNVID
DIQERLNFKQKNVFRMSFERKNLSYVVRQASDKEAELVHILNIVKGSAIVYVRSRKRTKE
VSQLLNKNNIKATYYHAGLEHFTKDIRQQEWQRDEIRVMVATNAFGMGIDKPDVRMVVHM
DCPDSLEAYFQEAGRGGRDGQKSYAVLLYNSSDARKLHKRIGDNFPEKDYIRKVYDSLAY
FYQIGVGSGVGHTFTFNIVDFCSAFHLSMMLVDAALHIIERLGYIVYENDPNNSARLMFL
LSRSQLYLLDNLSPMEDVVIDTLLRLYGGLFNDYVYIDEQLIAYKADLTQQQVYLVLKNL
SARHILHFIPQRKMPYVSFLRDRVDGELLVISREVYEDRKTEFEKRIQSVVSYAENDRIC
RSRQLLRYFGEKDSEDCRHCDVCLEKTTDQTHEGRVEPCRQAVLDFLADRKRHLLAELDT
LNLPERQLDEALEYLIQEEEIRLEGSYIWKE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcggcagatattacagcaatattgggggtatcccgactttcgtggtattcag
gaaaacatcatcaggagtatcggcgaaggtagggatacacttggtctgatgccgaccggt
ggaggaaaatccattacgttccaggtgccggctttagccaaagaaggggtctgcatcgta
gttacgccattgattgcattgatgaaagaccaggtagatcacctcttggagcggggcatc
aaggctgctgccatctattctggaatgacgcgtcaggagattatcaagactttggagaat
gctgttttcggtggtctgaaactgctctatatctctcccgaacgcctttcctccgaactg
ttcatagcaaagttccgccatatgaacgtgagtttcatcacagttgacgaggcacattgt
atcagtcagtggggctatgactttcgtccttcctaccttcatattgcagaaatccgcaaa
cttaaacccgaagtgcccgttcttgcactgacggctacggccacactgaacgtgattgat
gatattcaggagcgtctgaattttaagcagaaaaacgtctttcgcatgagttttgagcga
aagaacctcagttatgtagtccgacaggcttcggataaggaagcagaattagtgcacatt
ctcaatattgtcaagggcagtgccattgtttatgtgcgtagccgtaagcgtacaaaggag
gtttctcaactgctcaacaagaacaatatcaaggcaacttattatcatgcaggcttggaa
catttcacgaaagatatccgtcagcaggagtggcagcgtgatgaaatacgcgtaatggta
gcaacaaacgctttcggaatgggcatagacaagcctgacgtgcgtatggttgtccacatg
gactgccctgattccctcgaagcctacttccaggaagcgggccgcggaggtcgggacggg
cagaaatcctatgcagttttgctctataattcctctgatgcacgcaaacttcacaagcgt
attggcgacaatttcccagagaaagactatataaggaaagtctacgactcacttgcttac
ttctatcagataggggtaggcagcggagttgggcacacgtttacattcaatatcgtagat
ttttgcagtgcctttcatctttcgatgatgttggttgatgctgcacttcatattattgaa
cgcctcggttatatcgtttatgagaatgatcccaacaacagtgcgcggctgatgttcctg
ctgtcacgcagtcagctctatctgctcgacaatttgagtccgatggaagatgttgtcatt
gataccttgttgcgtctttatggagggctgttcaacgattatgtctatattgatgaacaa
ctcattgcatataaggccgatctcacgcagcagcaggtttatttggtattgaagaacctc
agtgcacgccatatcctgcatttcatcccacaacgtaagatgccttatgtcagttttctg
cgtgaccgtgtcgatggggaactgttggttatcagtcgggaggtctacgaagaccgtaaa
acggaatttgaaaagcgcattcaatccgttgtctcctatgctgaaaatgataggatttgc
cgtagtcgtcaactgctccgttacttcggtgaaaaggattctgaagattgtcggcattgt
gatgtgtgcctcgaaaagactacagatcagacccatgagggtagagtggaaccttgcaga
caggctgttctcgatttcttggcagacaggaaaagacacctccttgctgaacttgatacg
ctgaatttgcctgaaagacaattagatgaggcgcttgaatatcttattcaggaggaagaa
ataagattagaaggcagttatatctggaaagaataa
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