Segatella oris: NCTC13071_02279
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Entry
NCTC13071_02279 CDS
T06067
Symbol
rpoD_3
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
poc
Segatella oris
Pathway
poc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
poc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC13071_02279 (rpoD_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poc03021
]
NCTC13071_02279 (rpoD_3)
Transcription machinery [BR:
poc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC13071_02279 (rpoD_3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
VEH16255
UniProt:
A0A3S4VAY2
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All DBs
Position
1:2626751..2627623
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AA seq
290 aa
AA seq
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MRQLKIQKSITNRSSEALDKYLVEIGRAPLISIDEEIELAQKIKKGGRDGERAKEKLVTA
NLRFVVSVAKQYQHQGLSLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQA
IAEQSRIVRLPLNQVGSLNKINREINKFEQEFQRKPSLAELSSATKIEEEKIDQSLMADS
HHVSIDAPFQEGEDNSMVDVMAGGEDSRTDKQVDHESMALELESVLRKVLKDREITIIRE
CFGIGCHEKGLEEIGDQLGLTRERVRQIREKSIAKLRDSGYAKILMKYLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaattcagaagagtattacgaaccgttcaagcgaagccttggacaag
taccttgtagagattggtcgtgctccgttgatttccattgacgaagaaatcgaattagca
cagaaaatcaagaaaggtggtcgtgatggtgagcgtgcaaaggagaaattagtcactgcc
aatcttcgttttgtggtatctgttgccaagcagtatcagcatcagggactctccttgacc
gatcttattgatgaaggaaacattggtcttgtgaaggctgcagagaagtttgatgagacc
cgtggcttcaaattcatttcttatgcagtatggtggatacgtcaaagtattcttcaagcc
attgccgaacaaagccgcattgtgcgtcttccgcttaatcaggtgggttcactcaataag
attaatcgtgaaattaacaagtttgagcaggagttccagcgtaagccttcattggcagag
ttgtcaagtgctaccaaaattgaggaagaaaagatagatcagagcttaatggccgatagt
catcatgtgagtattgacgctccttttcaagagggtgaagacaacagtatggttgatgtc
atggcaggaggcgaagacagtcgtaccgataagcaggtggatcatgagtcaatggcactc
gaattggagtctgttttgcgtaaggttttgaaggatcgagagattactatcatccgtgaa
tgctttggaattggttgccacgagaagggacttgaggagattggagaccaacttggtctg
actcgtgagcgtgttagacaaattcgagagaaaagtattgcaaagctgcgagatagtggt
tatgcaaagattctgatgaaatatctgggataa
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