KEGG   Pezoporus occidentalis (night parrot): 134155537
Entry
134155537         CDS       T11716                                 
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform X1
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pocc  Pezoporus occidentalis (night parrot)
Pathway
pocc03018  RNA degradation
pocc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pocc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134155537 (LSM6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    134155537 (LSM6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pocc03019]
    134155537 (LSM6)
   03041 Spliceosome [BR:pocc03041]
    134155537 (LSM6)
Messenger RNA biogenesis [BR:pocc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134155537 (LSM6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     134155537 (LSM6)
Spliceosome [BR:pocc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    134155537 (LSM6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 134155537
NCBI-ProteinID: XP_062458814
LinkDB
Position
Unknown
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcctacggaagcaaacccccagcgacttcctaaaacagatcattggcagaccagtt
gttgtaaaattaaattctggagttgattatcgaggtgtcctggcttgcttggatgggtat
atgaatatagctctggaacagactgaagaatatgtaaatggacaattaaagaacaagtat
ggggacgcatttatccgaggaaataatgtgttgtacataagtacacagaagaggaggatg
tag

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