Pezoporus occidentalis (night parrot): 134156388
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Entry
134156388 CDS
T11716
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pocc Pezoporus occidentalis (night parrot)
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pocc04515
]
134156388 (CLSTN1)
Cell adhesion molecules [BR:
pocc04515
]
Cadherins
Cadherin related
134156388 (CLSTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
Toxin_R_bind_N
EphA2_TM
Glyco_hydro_16
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
134156388
NCBI-ProteinID:
XP_062460376
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MPPRRPGMPRSLLPAPAACLLLAGLLCGGAAAARVNKHKPWIETTYHGIVTENDNTVLLD
PPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKL
DCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEG
KRYDNILRVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLT
VTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGALALFPGMHLETCDEPV
TSIQATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTIGLPTDNG
HDSDQVFEFNGTQAVKIPDGVVTINLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRH
HYTLYVHNCRLVFLFRQDPSEEKTYKPAEFHWKLNQVCDKEWHHYVVSVEFPVVTLYVDG
VSYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELRMAQFFRGN
LAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTVEGEDIDRV
DKAMQHISYLNSRQFPTPGIRRLKITSVVKCFNEDACVSIPSVEGYVMVLQPEEPKISLS
GINHFARSASEFESSEGVALFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLD
TCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIHYR
NWHTASLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHT
FVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKE
NEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQ
EEDQQNVNRQQQLEWDDSTLSY
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgccgcccgggcatgccgcgctcgctgctgccggcccctgccgcctgcctg
ctgctcgccgggctgctctgcgggggagcggcggccgctcgagttaacaagcataagcca
tggattgaaacaacctatcatggtatagttacagaaaatgacaacacagtgctcctggac
ccccctttgatagccctggacaaagatgcacctctgcgttttgcagagagttttgaggtg
acagtcaccaaagaaggtgagatttgtggatttaaaattcacgggcaaaatgttcccttt
gaagcagtggtagtggataaatccactggggagggaataatacgctctaaggaaaagctt
gactgtgagctacagaaggactacacgttcaccatacaggcctatgactgtggcaaggga
ccagatggagcaaatgcaaagaaatcccacaaagcaacagtacacattcaggtgaacgat
gttaatgagtacgcccctgtgttcaaggagaagtcatacaaggcaacggttattgaaggg
aagaggtatgacaacatcctcagagtggaagcagtggatgcagactgctccccccagttc
agccagatttgcagttatgaaattgtaactccggatgtaccttttgctattgacaaagac
ggttatataaaaaacacagaaaagttaaactatggtaaagaacatcagtataaactgaca
gtaacagcatatgactgtgggaagaagagagctgctgaggatgtgttggttaaaattagc
attaagcctacatgcaagcctggctggcaaggctggagcaaaagaatagaatacgagcct
ggtactggtgcattagctctattccctggtatgcatttggagacatgtgatgagccagta
acctcaattcaagcaacggttgaactagaaaccaaccatattggtaaaggctgtgacaga
gacacctactctgagaaatccattcacagactttgtggtgctgcttctggcacagctgag
ctacttccacctccaagtagtgctgctaactggacgataggacttcctacagataatggt
catgacagtgaccaagtctttgaattcaatggcactcaagctgtgaagattccagatggt
gttgtcacaatcaatctaaaagagcccttcatgatttcagtatggatgaggcatgggccc
ggaaccaaagagaaagaaacaattctgtgcaattcagacaagacagatatgaaccggcac
cattacacgctctatgtgcacaactgccgacttgttttccttttccgccaagatccttca
gaggaaaaaacatacaaacctgccgagtttcactggaaactgaaccaagtgtgtgacaag
gagtggcatcattatgttgtcagcgtggaattcccagtggtaactctctacgtggatggg
gtttcctatgatcctttcccagtgactgaggattacccacttcatccctcaaagatagag
acgcagctagtagttggagcgtgttggcaagaatatacaggaaatgaaaatgacaatgaa
actgtgcctgagacctctgcaggtggtgaactccgcatggctcagtttttccgaggcaac
ctggcaggtctgatgatccgttctggtaaactggagaacaagaaggtgattgattgcctg
tacacgtgcaaggagggactggatttgcagatggctgatggtgttggcaaaggcgtgaag
atccacatgaacccgagtcagtcaacgctgactgtggaaggggaagacattgacagagtt
gacaaggccatgcagcacatttcctacctgaattcccgacagttcccaacacctgggatt
cggaggcttaaaatcaccagtgttgtcaaatgtttcaatgaagatgcctgtgtctccatt
ccttctgtggagggatatgtaatggtcttgcaaccagaggaaccgaaaatcagccttagt
ggcatcaaccattttgcccgctctgcttcagagtttgagagctccgaaggtgttgccctc
tttcctgagcttcgcataataagcaccattacacgggaggtggagccagagggagatgga
gatgaagatcctacagtacaagagtcgttggtatctgaagagatcatgcataacctggat
acgtgtgaggtgacagtgctaggagaagagctgaatcaggaacaggaaagcctggagatt
gatatgacacggttacagcagaagggcatcgagatgagtagttccaacctgggcatgata
atcacaggggttgatactatggctagttatgaagaagttttgcacttgatacactacagg
aactggcacactgcttccctcttcgacagaaagttcaagttagtgtgttctgagcttaat
ggtcgctacgtcagcaacgagtttaaagtggaggtgaacgtcatccacaccgctaacccg
gttgagcacgccaatcacatagctgcacagccgcagttcgtgcacccggtgcaccacacg
tttgttgatctctctggtcacaacctggctaatcctcacccattttcagtcgttccaagc
acagccactgttgtgattgtagtttgtgtcagcttcctggttttcatgattattctggga
gtgttccgaatccgagctgcacatcagagaacgatgcgtgaccaggacactggaaaggag
aacgagatggactgggatgactctgctttgaccatcactgtgaaccccatggagacttat
gaggatcaacacagcagtgaagaggaggaggaggaagaggaagaagaaagtgaagatgga
gaagaagatgacatcactagtgcagagtctgaaagcagcgaggaggaagagggagagcag
gaggaggaccaacagaatgttaatagacagcaacagctggaatgggatgactctaccctc
agttactga
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