Pezoporus occidentalis (night parrot): 134157955
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Entry
134157955 CDS
T11716
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03013
Nucleocytoplasmic transport
pocc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134157955 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
134157955 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pocc03019
]
134157955 (THOC2)
03041 Spliceosome [BR:
pocc03041
]
134157955 (THOC2)
Messenger RNA biogenesis [BR:
pocc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134157955 (THOC2)
Spliceosome [BR:
pocc03041
]
Complex C
Other components
EJC/TREX
134157955 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134157955 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
134157955
NCBI-ProteinID:
XP_062463446
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRAVSENKSHDSMGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSELILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIVEEHKREI
MEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTVEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTVKKFVSDRVVKFQSDGSK
QEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKN
DTYNSHPLLVKVKAQTIDRAKYIMNLSVPIKYVPFHRRLTKENVKPSGRQIGKLSHSNPT
ILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISS
WLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTM
EQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQE
GGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFL
SRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDIS
PQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDK
LLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCA
HFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDR
VIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEY
THIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRK
PFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTVRLEEGTAEETEKLKEKSQ
GVVKVVNKAVNATPKVTTSNGNSASNSKIVKEKEDKEKSGKEKDKEKKDKTPAATPEMKA
LGKDGKDKPKEERANKDDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIVESKS
TSEKEREKEPSRERDVAKEMKSKENAKGGEKVPVAGSLKSPVPRSETSESEREQKRRKVD
THSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKK
DDKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNK
SKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccctgccgagtggataaagaactgggagaaagggggcaagaacgag
ttcgtgcagttatgtcgtgcagtcagtgaaaacaaaagccatgattctatgggtttcaga
gatatccagcaagctctgtatgagcttgcataccatgtcgtcagaggaaacttaaagcat
gatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatgccttccatc
ctagctgatgtattctgcatattagatattgaaacaagctgtttagaagaaaaaagtaag
agagatcactttacccagctggtattagcctgtttgtatcttgtatctgacactgtccta
aaggaacgtttagatccagagacactggagtcattaggacttatcaagcagtcgcagcag
ttcaatcagaaatcagttaaaataaagacaaaactattttacaagcaacagaagtttaat
ttattgagagaggagaatgaaggttatgcaaagctgattgcagaactggggcaagactta
tctggaaatatcactagtgagctaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaggtttatgagtgcaggcccgag
tatgatgacttctttgtaccactgatagaatcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacgcct
tcttccttatacagagttgctgctgtcctcctgcaacataatctcatagatttggaagac
ctttatgttcatcttcttcctggggataatgccattgttgaggaacacaagcgagagatc
atggaagctaagcaaattgtcaggaagcttacaatggttgtcttatcctcggaaaaaact
gaggaaaaggagaaggaaaaagaaaaagaggaggaaaaaaccgaaaagcctcctgataat
caaaagcttggcttattggaagctttattaaaaattggtgactggcagcacgcacaaagt
attatggatcagatgcccccgttttatgctacttcacacaagcctattgcaattgccctt
tgtcagcttgtacatgttacagttgaacctctgtaccgcagagttggtgtacctaaagga
gctaaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagacagc
tttgaggacctgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctttcc
catgatcccattttattcgcaaaagtggtgcgtcttggaaaagcatttatgaaggaggtt
ggaactgtgaagaaattcgtcagtgacagagtggttaagtttcagtctgatggaagcaag
caagaagataaagagaaaatggagatactgtttagctgtctgctgagtattactgatcaa
gtcttactgccatctctttctctgatggactgcaatgcatgcatgtctgaagaactatgg
ggaatgttcaaaacttttccgtatcagtaccggtaccggctttatggacaatggaagaat
gacacatacaatagtcacccacttctagtgaaagttaaagctcagactatagaccgagcc
aaatatatcatgaacttgtctgttccaataaaatatgttccctttcacaggcgtttaact
aaggaaaatgtgaaaccttctggaagacaaattgggaagctcagccacagcaatcctaca
attttatttgattatatcttatcgcaaatacaaaaatacgataacttaataactccggtt
gttgattcactaaaatacctcacttcgctgaactatgatgtcttggcatactgtattatt
gaagctctggcaaaccctgagaaggagagaatgaagcacgatgacactacaatctcaagc
tggctgcagagtctggcaagtttttgtggtgcagttttccggaaatacccaattgaactt
gctggtctacttcagtatgtagccaaccaattgaaagctgggaaaagctttgatttgctt
attttaaaagaggtagtgcagaaaatggcagggatagaaatcacggaagaaatgacaatg
gagcaattggaagccatgactggtggagaacaactaaaagctgagggtggatactttggc
cagatcaggaacacgaaaaaatcttctcagagattgaaagatgcattattggaccatgat
cttgcccttccactgtgcctgcttatggctcaacagagaaatggtgtgatctttcaagag
ggaggggaaaaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccctg
gtacagtttggtgggtttttagcatccaatctaagcacagaggattacattaagcgagtg
ccttctattgatgttctctgtaacgagtttcacacacctcatgatgctgcatttttcctc
tcaagacccatgtatgcacatcatatttcatcaaagtatgatgaactaaaaaaagctgag
aagggcaataagcagcagcacaaagttcacaaatacattacatcgtgtgagctggtgatg
gctcctgttcatgatgctgtgatttctctgcaccttcccaaagtatgggatgacatcagt
cctcagttttacgctacattctggtctttgacaatgtatgaccttgccgtcccacatagt
agctatgacagagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcag
gaaatgcctccaaataaaaagaagaaagaaaaagaacgttgcacagctctccaggacaag
cttcttgaagaggagaagaagcagttggagcatgtgcagagggtcctacagagactgaaa
ctagagaaggataactggcttctggcaaagtctacgaaaaatgagactatcacaaaattt
ctgcagttatgtatatttcctcggtgcattttttcggcaatcgatgcagtttattgtgct
cactttgtagaactggtgcatcagcagaaaacacccaacttctccacacttctttgctat
gacagagttttctctgatattatatatacagttgcaagttgcactgaaaatgaagctagt
agatatggcaggtttttgtgctgtatgctggagactgtgactaggtggcacagtgacaga
gtcatatatgaaaaggaatgtggcaactatccaggtttcctaactatattacgggcaact
ggatttgatggtggaaataaagctgatcaattggattatgagaattttagacatgtggta
cacaaatggcactacaaactaactaaggcttctgtgcactgccttgaaacgggggaatac
acacatatcagaaatatcctgattgtgctgaccaaaatccttccatggtatccaaaagtg
ctgaatctgggccaagccttggaaagaagagtacacaagatatgtcaggaagagaaagag
aagagacctgatctatatgcattggctatgggctattctgggcagttgaaaagtaggaag
cctttcatgatacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgta
gctgcaacagtacaaaatgggccaggtggtgctgggatgcctacatctctcacaataaat
acagttagactggaagaaggcactgctgaggagactgagaaactaaaggagaagtctcag
ggtgtggtgaaggttgttaataaagctgtaaatgctacaccgaaggtgactacaagcaat
ggaaacagtgcttctaatagcaaaattgttaaggagaaagaggataaagaaaaaagtggg
aaggaaaaagataaagaaaaaaaagacaagactccagctgccactccagagatgaaggca
cttgggaaggatgggaaagataaacctaaggaagaacgggcaaataaagatgataaagca
agagagatcaaggagaaaacgccaaaatcggacaaggagaaggaaaaggtcaagaaagaa
gaaaaagcttcaaaagaagaaaaatccaagacagttgttaccatcgttgagtcaaagtca
acgtcagaaaaggagagagaaaaggagccatccagagaaagagatgtagcgaaggaaatg
aaatccaaggaaaatgctaaaggaggagaaaaggtgccagtagctgggtccttgaagtca
cctgttccccgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgat
acacattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactcaaggac
tcttcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggagaga
gaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaa
gatgacaaggacaggaaggatcgaaaaagggatcattcaaacagtgaccgggaggtacca
caggattcaactaaaagacgcaaagaggaaaacggaacaactggttcttcaaaacatagt
aaaagtgaaagtccatcagattcccctcgcttaaatgaaaaggagaaggagaagaacaaa
tcaaaatcttcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaagagc
tcctctggtagcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaa
cgagacagtactggaggaaaggaagaaaagaaacatcataaatcttcagacaagcacaga
taa
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integrated database retrieval system
