Pezoporus occidentalis (night parrot): 134160897
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Entry
134160897 CDS
T11716
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03013
Nucleocytoplasmic transport
pocc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134160897 (UPF3B)
03015 mRNA surveillance pathway
134160897 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pocc03019
]
134160897 (UPF3B)
Messenger RNA biogenesis [BR:
pocc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134160897 (UPF3B)
mRNA cycle factors
P-body specific factors
134160897 (UPF3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
134160897
NCBI-ProteinID:
XP_062469332
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MKEDKENARPKERRGAGSGLGALLGAGSGTGTAAAGDSRTGAAELDRLERPKDKKETLSK
VVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRD
RFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDE
KLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEE
RRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLERKEKSKKL
EKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDYERDREYERAQREKL
RRQEEERRRQKERFEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSSMDKSEKVTKDD
KKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPADQGADKKQESETSNMKE
EE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgcgaggccgaaggagcggcgcggggccggctccgggctg
ggggctctgttgggggcggggtcgggcacgggcaccgccgccgctggggacagcaggacc
ggcgctgctgagctcgaccgcctcgagcggcccaaggacaagaaggagacgctcagcaag
gtggtgatccggcggctgccgcccagcctgacgaaggagcagctggaggagcatctccag
cccctgcccgagcatgactacttcgagttcttcgccaacgactccagcttgtaccctcac
atgttctcgagagcctacatcaacttcaaaaaccaggaagacatagtcctcttcagggat
cgctttgacggctatgtttttgtcgaccacaaaggtcaggaatatgctgctatagttgag
tttgcacctttccaaaaagctgcaaaaaagaagagtaagaaaaaggatgcaaaaactgga
accattgaagatgatccagagtacaagaagtttctggaaagttacagtgcagatgatgaa
aaattaacttccactccagaaactttgttggaggaaatagaggcaagaaacaaagagctc
atagctaaaaagactactccattattgaacttcttgaaaaataaacagagactgagagaa
gaaaaaagagaggagaggaggaggagagaattggaaagaaaaagacaaagagaagaagaa
agaagaaaatggaaagaggaggagagaaggaagagaaaagaagcagaaaaactgaagaag
gtagacagatgcccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagctg
cttaagaagcctgaaaaagatgaaaaagacttggagagaaaagaaaaatccaagaaactg
gaaaaagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgat
ggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggactacagg
gaccgagatagagattatgaaagagacagagaatatgagagagcacaaagggagaaactg
aggcgccaagaagaggagcgtcggaggcagaaagagcgctttgagaaagagaaggttttt
agaagaaaagaggaagaggtgaaaaaggagagagacttactcagagaaaagggaaagaaa
agtgatcttacagactttaccagcagcatggacaaatctgagaaagtaaccaaagatgat
aaaaaagaggatacaattaagagggatcgtatcagaaacaaggatcgtccagcaatgcag
ctgtaccagccaggagcccgaagccgaagcagattgtgtcagtatgaagacagtgctgca
aagcctgcagatcagggtgcggataagaaacaagaaagtgagacgagtaatatgaaggaa
gaggagtga
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