Pezoporus occidentalis (night parrot): 134164183
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Entry
134164183 CDS
T11716
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134164183 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pocc03041
]
134164183 (SF3B1)
03036 Chromosome and associated proteins [BR:
pocc03036
]
134164183 (SF3B1)
Spliceosome [BR:
pocc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134164183 (SF3B1)
Complex B
134164183 (SF3B1)
Complex C
U2 SnRNP specific factors
134164183 (SF3B1)
Chromosome and associated proteins [BR:
pocc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
134164183 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
PIK3R4-like_middle
Adaptin_N
Phage_T7_Gp15
Motif
Other DBs
NCBI-GeneID:
134164183
NCBI-ProteinID:
XP_062475652
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacaaattcgagagattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattacgat
caagaaatttatggtggcagtgacagcaggtttgctggatatgtcacttctattgcagca
actgaattggaagatgatgatgatgactacccttctacaagtttgcttggccagaagaag
ccagggtaccatgctccagtggcattgcttaatgacataccacagtctaccgaacagtat
gatccttttgcagagcaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttctcctgagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacgtacatggatgttatgcgtgaacagcattta
acaaaagaagagagggaaattaggcaacaactagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagactcctggtgctacacccaaaaagttatccagttgggatcaagcagag
actcctggacatacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagt
gaaactcctggtgccaccccaggctcaaaaatatgggatccgactccaagtcatacacca
gcaggagccgcaacacctggtcgggacacacctggtcatgcgacaccaggccatggaggg
gccacttccagtgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccgggacatggcagtggatgggctgagacgcctcgtacagatagaggtggtgattccatt
ggtgagacaccaaccccaggagcaagtaaaaggaagtcacgatgggatgaaacacccgct
agccagatgggtggcagcactcctgttctgacacctggcaaaacacccattggtacccca
gctatgaacatggcaacccctacaccaggtcatatcatgagcatgactcctgaacagctg
caggcttggcgttgggaaagggaaattgatgagagaaacagaccactttctgatgaagaa
ttggatgcaatgtttccagaaggatataaggttcttcccccaccagctggttatgtacct
attcgcaccccagctcggaagcttacagcaactccaacacctttgggtggtatgactgga
ttccacatgcagacagaagaccggactatgaagagtgttaatgaccagccatctggcaac
cttccattcctgaaaccagatgatatccaatactttgataaactgctggttgatgttgat
gaatcaactctgagtcctgaagaacagaaggagagaaaaataatgaaattgcttctgaag
ataaagaatggcacacctcccatgagaaaggctgcgttgcgacaaattacagataaagct
cgggagtttggagcagggccactgtttaatcagattctgcctctgctgatgtccccaaca
cttgaagatcaagagcgtcacttgcttgtcaaagtaatcgacagaattctttacaaactg
gatgatttggtccgaccatatgtacataagatccttgttgtcattgaaccactgctgatt
gatgaagactactatgctagagtggaaggcagagaaatcatttcaaacttggctaaggct
gctggtttggcaacaatgatctccacaatgcgacctgatattgataatatggatgaatat
gtcagaaatacaacagcccgagcctttgctgttgttgcctctgctttgggcattccttcg
ctgttaccattcttgaaagctgtctgtaaaagcaagaaatcctggcaggctaggcatacc
ggtatcaagattgtacagcagattgctattcttatgggttgtgctatcttgcctcatctg
aggagcttggttgaaattattgaacatggtttggtggatgagcagcagaaagtccgcacc
attagtgctctggctatcgctgctttggctgaggcagctactccctatggtatcgagtca
tttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggtttg
gctgcctttctgaaggctattggttacctgattccgctcatggatgctgagtatgcaaac
tattataccagagaagtcatgctaatccttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgtgctaaaggtggtaaagcaatgttgtggtacggatggtgttgaagca
aactacattaaaacagaaatcttgccaccttttttcaagcacttctggcagcacagaatg
gcattggacagaagaaattacagacagttggttgatacaactgtggagcttgccaataaa
gttggagcagcagaaattatctccagaattgtggatgatctgaaagatgaggctgagcag
tacagaaaaatggtcatggaaacaattgagaagatcatgggaaatctgggggcagcagac
attgatcataagctggaagaacagcttattgatggtatcttgtacgccttccaggaacag
accacagaggattctgtgatgctgaatggctttggcacagtggttaatgctctagggaaa
agagttaaaccctatttgccacaaatctgtggtacagttttgtggcgtttgaacaacaaa
tcggctaaagttcggcagcaggctgctgacctcatctctcgtactgcagttgttatgaag
acttgtcaggaggaaaaactgatgggacacttgggtgttgtgttgtatgagtacctgggt
gaggaatatcctgaagtactgggcagcatactcggagcacttaaagctattgtgaatgtt
ataggtatgcacaagatgacaccaccaatcaaagatctgttgccacggcttacacctatt
ttgaagaacagacatgagaaagtacaggaaaattgtattgatcttgttgggcgtattgca
gacaggggtgcagagtatgtttctgcaagagaatggatgaggatctgctttgaactgctt
gagttattaaaagctcacaagaaagctatccgaagagccacagtgaacacttttggttat
attgcaaaagccattggacctcatgatgtattggctacactgctaaataacttgaaagta
caggaaaggcagaacagagtatgtactacagtagcaattgctattgtagctgaaacatgc
tcaccattcacagtgctgcctgcgctcatgaatgagtacagagttccggaactgaatgtc
cagaatggtgtattaaaatctctttccttcctgtttgaatacattggagagatgggaaaa
gattacatttatgctgttacaccattgcttgaagatgctttaatggacagggatcttgta
cacagacagactgccagtgccgtggtgcagcatatgtctcttggtgtttatgggttcggc
tgtgaagattctcttaatcatttgttaaactatgtatggccaaatgtgtttgaaacctct
cctcatgtcattcaggcagttatgggggctctggagggcctcagagttgctattggtccc
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagac
gtttattggaagatctataattcaatctacataggatcacaggatgctctgatagcacat
tatccacgaatctataatgatgaaaagaacacctatattcgttatgaacttgattacatc
ttataa
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