Pezoporus occidentalis (night parrot): 134170830
Help
Entry
134170830 CDS
T11716
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134170830 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pocc03019
]
134170830 (CLP1)
Enzymes [BR:
pocc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
134170830 (CLP1)
Messenger RNA biogenesis [BR:
pocc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
134170830 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
TniB
MMR_HSR1
AAA_16
AAA_18
ATP_bind_1
AAA_22
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
134170830
NCBI-ProteinID:
XP_062488545
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MATRAAAAPPSPPGRAVLTSLPAQLSAPEARRLRAEGRAMADDGGEEKKQVAKFELERET
ELRFEVEASQTVQMELLSGMAEVFGTELTRNKKFTFDAGAKVAVFTWHGCTVQLSGRTEV
AYVSKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRL
GRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYHFGSTTPGTNIKLYN
KITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQER
LYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFDVKF
SDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTADSPDDSISGT
SVAGFIVVTGVDPERQVFTVLSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgcgccgctgctgcccccccctccccccccgggcgcgcagttctgacatca
cttccggcgcagctttctgccccggaagcgcggcggctccgcgctgagggtcgcgccatg
gcggacgacggcggcgaggagaagaagcaagtggccaagttcgagctggagcgggagacg
gagctgcggttcgaggtggaggcgtcgcagacggtgcagatggagctgctcagcggcatg
gccgaggtgttcggcaccgagctcacccgcaacaagaagttcacgttcgacgccggcgcc
aaggtggccgtgttcacgtggcacggctgcaccgtgcagctcagcggccgcaccgaggtg
gcctacgtgtccaaggacacgccgatgctgctgtacctcaacacgcacacagcgctggag
cagatgcggcgccaggcagagcgcgaggacgagcgtgggccccgcgtcatggtggtggga
cccaccgacgtgggcaagtccaccgtgtgccgcctgctgctcaactacgccgtgcgcctg
ggccgccggcccacctttgtggagctggacgtggggcagggctctgtctccatccccggc
accatgggcgcgctgtacatcgagcggccggccgatgtggaggagggcttctccctccag
gccccgctcgtgtaccacttcggctccaccacgcctggcaccaacatcaagctgtacaac
aagatcacgtcccgcctggccgacgtgttcaaccagcgctgtgaggtgaaccgccgcgcc
tcggtcagtggctgcgtcatcaacacctgcggctgggtgaagggctctggttaccaggca
ctggtgcacgccgcctccgccttcgaggtggatgtggtggtggtgctggaccaggagcgg
ctctacaacgagctcaagagggacctgccccactttgtgcgcacggtgctgctgcccaag
tctggtggcgtggtggagcgctccaaggacttccgccgggagtgccgggatgagcgcatc
cgtgagtacttctatggcttccgtggctgcttctacccccacgccttcgatgtcaagttc
tccgacgtgaagatctacaaggtgggggctcccaccatcccggactcctgcctgccgctg
ggcatgtcgcaggaggacaaccagctgaagctggtgccggtgacgccggggcgggacatg
gtgcatcacctgctgagcgtcagcactgccgacagccctgacgacagcatctcgggcacg
agcgtggcggggttcatcgtggtgacaggcgtggaccccgagcgccaggtgttcaccgtg
ctctcgcccgcgccgcgcccgctgcccaagaacttcctgctcatcatggacatccgcttc
atggacctcaagtag
DBGET
integrated database retrieval system
