Pezoporus occidentalis (night parrot): 134172538
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Entry
134172538 CDS
T11716
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc04140
Autophagy - animal
pocc04142
Lysosome biogenesis
pocc04145
Phagocytosis
pocc04148
Efferocytosis
pocc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134172538 (VPS39)
04142 Lysosome biogenesis
134172538 (VPS39)
04140 Autophagy - animal
134172538 (VPS39)
04148 Efferocytosis
134172538 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134172538 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pocc04131
]
134172538 (VPS39)
Membrane trafficking [BR:
pocc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
134172538 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
LIF1_N
DUF4145
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
134172538
NCBI-ProteinID:
XP_062491687
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEETGADFHNCLIQLYCEKVQALMKEYLNSFPPDKTPVPAGEEGGDLGDYRK
KLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHSEFLRVQEERILHQQV
KCIITEEKVCTVCKKKIGNSAFARYPNAKVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcctttgagcatgtgccgatcctggagaagctgcccctgcagatcgactgc
ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttctgctttac
aggatcaagaaagacataggagaggttatgtcatcagaaagtgtctgttgcaatagattt
gaagtgacgctagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgtt
gtttctcagtttaaaattctggtcagtctattagaaaataacatttatgtccatgacctg
ttgacatttcaacaaatcaccactgtttccaaggcaaaaggtgcgtctctcttcacttgt
gatcttcagcagtcagatacaggggaagaggtgctgagaatgtgtgtggcagtgcggaag
aaactacagctttatttttggaaggacagagagttccatgaactacagggggacttcagt
gtacctgatgtacccaagtccatggcctggtgtgaaaactccatctgtgtaggctttaag
agggactattacctaatacgggtggatggaaaaggatccatcaaagaactgtttcccaca
gggaagcagctggaaccattggtagctcctgtagcagatggaaaagttgcggttggccaa
gatgatctaacagttgtgctcaatgaagaaggggtctgtactcagaaatgtgccttgaat
tggacagatattcctatagccatggagcaccagcctccctacatcattgctgttttgccg
aggtatgtggagatccgtacttttgagccccggctgctggtacagagtattgagctgcag
agaccacgcttcatcacctctggaggcacaaatattatatatgtggcaagtaatcacttc
gtttggcggcttattccagtgtccatagccacacagatccagcagcttctgcaggacaag
caatttgagttggctttgcagttagcagaaatgaaggatgattcagatagtgagaagcga
caacaaattcaccacataaagaacctctttgccttcaaccttttctgccagaagcgcttt
gatgaatccatgcaagtttttgccaagcttggtacagatcccactcatgtgatgggtctg
tatcctgacctcctgcccacagattacaggaaacagctacagtatcccaacccgctgcca
gggctctcaggggcagagctggagaaggcacatttagctctgatagactacctaactcaa
aagagaagtcagctggtaaagaagctaaatgattctgaccatcagtctagtacctcaccc
cttatggaaggaacacccactatcaaatccaaaaagaagctgttacaaatcattgatacc
accttgttaaagtgttacctccatacaaatgtagcactggtggcaccactgctgcgtctg
gaaaacaatcactgccatattgaagagagtgagcatgtactaaagaaggcacacaaatat
agtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtactg
gtggatcaatcaaagaaagccaactcacctttgaagggtcatgagaggacagtgcagtat
ctgcagcatttgggcacagagaatttgcacttggtattttcctactctgtctgggtgcta
agagattttcctgaagatggactgaaaatatttacagaagacctccctgaagtggaagct
ttgccacgagacaaagtgctcagtttcttgatagaaaatttcaaaagcttgactattcct
tatctggagcacatcattcatgtctgggaagaaaccggtgcagacttccataactgtctg
atccagctgtactgtgaaaaagtgcaggccttgatgaaagaatatctaaattctttccct
ccagataaaacgccggtgcctgctggggaggaaggaggagacttgggggattaccggaaa
aagcttctactttttctggagaagtctagctggtatgagccaagcagactaatcagtgac
ttcccctttgatggtctcctagaagagcgtgctctgctcttgggtcgtatggggaagcat
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatggcaacaaagatgtctacctgtcattgctc
cggatgtatctttccccacctagtgttcactgcctgggaccaatcaagatggaagtgcta
gaacctcaagccaatctgcaggctgctctgcaggttttggaactgcatcacagcaaactg
gataccaccaaggcaataaacctgctcccagcaaatacacagataagtgagattcgaatc
ttcttagagaaagtccttgaagaaaatgctcagaagaaaagatttaatcaagtactcaag
aatcttctccattcagagtttctgagggtccaggaggagaggatcttgcatcagcaagtg
aagtgcattattaccgaggagaaggtgtgcactgtatgtaaaaagaagataggtaacagt
gcatttgctcgataccctaatgcaaaagttgtgcattatttctgctccaaagaagtcaac
acattggatacctga
DBGET
integrated database retrieval system
