Pezoporus occidentalis (night parrot): 134173284
Help
Entry
134173284 CDS
T11716
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03420
Nucleotide excision repair
pocc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134173284 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
134173284 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pocc04121
]
134173284 (DDB1)
03400 DNA repair and recombination proteins [BR:
pocc03400
]
134173284 (DDB1)
Ubiquitin system [BR:
pocc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
134173284 (DDB1)
DNA repair and recombination proteins [BR:
pocc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134173284 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
134173284 (DDB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
134173284
NCBI-ProteinID:
XP_062493107
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC
LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaactacgtggtgacggcgcagaagcccacggccgtcaacggctgcgtcacc
ggacacttcacctcggcagaggatttgaacctgctcattgccaagaacacgcggctggag
atctacgtggtgacagcagaggggctgagacccgtcaaggaggtggggatgtacggcaag
acagcagtgatggagctcttccgccccaagggggagagcaaggacttgttgttcatcctg
acagccaagtacaacgcctgcatcctggagtacaagcagaacggagacaacattgacatc
ataacccgagcgcatggcaacgtgcaggatcgcatcggccgcccctcggagaccggcatc
atcggcatcattgaccccgagtgccgcatgatcggcctgaggctctatgatggcctcttc
aaggtcatccccttggacagggagaacaaggaattaaaggcttttaacatccgcctggaa
gagctccaagtcatcgatgtgaagttcctctatggctgtcaggctcccaccatctgcttt
gtctaccaggaccctcagggtcgccacgtgaagacgtacgaggtgtccctgcgcgagaag
gagttcaacaaagggccctggaaacaggagaacgtggaagctgaagcctccatggtcatt
gcagtgccagagcctttcggaggcgcgatcatcattgggcaggagtccatcacctaccac
aacggagacaaatacctggctatagctccacctatcatcaagcaaagcacaatcgtgtgc
cacaaccgcgtggatcccaatggatcccgttacttgctgggggacatggaaggacgcctc
ttcatgctgctcctggagaaggaggagcagatggatggcactgtcaccttgaaggacctg
cgcgtggagctgctcggagagacatccatagcagagtgtttgacctacctggacaacgga
gttgtgttcgttggctctcgccttggggattcccagcttgtgaagctcaacgtggacagc
aacgagcagggctcctacgtggtggccatggagaccttcaccaaccttgggcccattgtt
gatatgtgtgtggtagacctggaaagacaaggccaagggcagctggtcacatgctcaggt
gcatttaaagagggctccctgcggatcatccggaatggcattgggatccatgaacacgcc
agcattgacctgccagggattaaaggattgtggcccctgaggtcggattctcatcgggag
acagacaatacgttggtgctgtccttcgttggccagaccagggttcttatgttaaatgga
gaggaggtagaggagacagagctcacggggtttgtggatgatcagcagaccttcttctgt
ggcaatgtggcacaccagcaattgatccagatcacctctgcctctgtgagactggttagt
caggagcccaaagccctggtgagtgaatggaaagagcccaatggcaagaacatcagcgtg
gcttcctgcaacagtaaccaggtcgtggtggctgtgggacgagccctgtattacctggag
atccgaccccaggagctcaggcagatcagctgcacagaaatggagcatgaagttgcctgc
ctggacatcacccctctgggggacagcaatgggatgtccccgctgtgtgcaatcgggctc
tggactgacatctctgcccgcatcctcaaactgccttcctttgagctgctgcacaaagag
atgctgggaggagaaatcatccctcgctccatcctgatgacgacctttgagagcagccac
tacctcctgtgtgccctgggggatggagcgctcttctacttcgggctcagccttgagaca
ggtttgctgagtgacaggaagaaggtgacccttggcacccagcccactgtcctgaggacc
ttccgctctctgtccaccaccaacgtgtttgcctgctccgaccgtcccaccgtcatctac
agcagtaaccacaagctggtcttctccaacgtcaacctgaaggaggtgaactacatgtgt
cccctcaactcggatggctatcctgacagcttggcattggccaacaacagcaccctgaca
attggcaccattgatgagatccagaagctgcatatccgcaccgttcccctctatgaatca
cccaggaagatctgctaccaggaggtgtcccaatgctttggggtgctctcgagtcgtatc
gaggtgcaggatgccagtggaggcaccactgcactcagacccagcgccagcacccaggcc
ctctccagcagtgtgagcaccagcaagctgttctccagcagcacagccccccacgagaca
tcctttggagaggaggtggaggtgcacaacctgctcatcatagatcagcacacctttgaa
gtgcttcacgctcaccagttcctacagaacgagtacgccctcagcctggtctcctgcaag
cttggcaaggaccccaacacctacttcatcgtgggcactgccatggtgtatcccgaggag
gcagagcccaagcagggccgcatcgtggtcttccactactccgacgggaagctgcagagt
ctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaatgggaagctc
ttagccagcatcaacagcacggtgcgcctctatgagtggacagccgagaaggagctgcgc
acggagtgcaaccactacaacaacatcatggctctctacctgaagaccaaaggggacttc
atcctggtgggagacctcatgaggtccgtgctcctcctcgcatacaagcccatggaaggg
aacttcgaggagattgcccgggacttcaatccaaactggatgagtgctgtggagatcctg
gacgatgacaacttcttgggagcagagaatgctttcaacttgtttgtgtgccagaaggac
agcgcggccacgaccgatgaggaacgtcagcacttgcaggaggtgggcttgtctcacctg
ggagagtttgtcaatgtcttctgccacggatctctggtcatgcagaacctgggtgagacc
tccacaccgacccagggctcggttctcttcggcacagtcaatggcatgattggcctggtg
acctcgctgtcagagagctggtacaacctcctcttggacatgcagaacaggctgaataaa
gtcatcaagagtgtgggcaagattgagcattccttctggagatcgtttcacaccgagcgc
aagacggaaccagccacggggttcatcgatggcgacctgatcgagagcttcctggacatc
agcaggcccaagatgcaggaggtggtggcaaacttgcagatcgatgatggcagtggcatg
aagagggaagccaccgtagacgacctcataaagatcgtggaggagctgacccggatccat
tag
DBGET
integrated database retrieval system
