KEGG   Pezoporus occidentalis (night parrot): 134174052
Entry
134174052         CDS       T11716                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pocc  Pezoporus occidentalis (night parrot)
Pathway
pocc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pocc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134174052 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pocc03400]
    134174052 (TDP1)
DNA repair and recombination proteins [BR:pocc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     134174052 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 134174052
NCBI-ProteinID: XP_062494595
LinkDB
Position
Unknown
AA seq 604 aa
MLQEGAHGKWTVSSSDESPEENSDSEKPSTSSVLDAACDTSVPQYPCSEARKAAQKRKTS
PLKFSDKRFSAEAPPAGKQRASQEGSGWCLSSSDEEPEDQEKHAHKGTVKEEKTDAPKHP
LKLCKDDELSENQKAEEYYEAPSETQDTWDLLNGGNPFRFFLTKVRGIHQSYNYGALHIK
DILSPLFGTLVSSAQFNYCIDVAWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARPYE
NISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWHQKTQGIWLSPLYPRLP
QGTSGSAGESETNFKSDLISYLMAYNSPTLKEWIDLIQEHDLSETRVYLLGSTPGRYQGS
DKEKWGHLRLRKLLKEHALSIPAQESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAAGR
SVMSLKCDVPVHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAEVSG
RSHAMPHIKTYMRSSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPS
AFGLDKGCFHVKGKMLSESDNPGTYFPVPFDLPPEQYGSKDQPWIWNIPYTDAPDTHGNM
WVPS
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacatggaaaatggacagtatctagcagtgatgaaagtcctgag
gaaaattctgacagtgaaaagccatctacatcttcagtattggatgctgcatgtgacaca
agtgtgccacagtatccatgctctgaagcaagaaaagctgctcaaaagagaaaaacttct
cccctgaagttcagtgataaaaggttttctgcagaagcacctccagcaggaaaacagaga
gctagccaagaaggctcaggctggtgtctttctagtagtgatgaagagcctgaagatcag
gaaaagcatgcccacaaaggaacagtgaaagaagaaaaaactgatgcaccaaaacatcct
ctgaaactttgcaaagatgatgaactctcagagaatcagaaagcagaggagtattatgaa
gcacccagtgaaacccaagatacctgggatttgttgaatggagggaaccctttcaggttt
tttctcactaaagtcagaggaattcatcagagttataattatggagccctgcatataaaa
gatatcttgtctcctctttttgggactctggtttcttctgctcagtttaactactgcata
gatgtggcctggcttgtgagacagtatccgcaggaattcaggaagaagccattattgata
gttcatggtgaaaagagagaatctaaagctgaattgcttgcacaagcacgcccttatgag
aacatcagcttttgtcaggccaaactggatattgcatttggaactcaccatacgaaaatg
atgttgttgttgtatgaggaaggtcttcgagttgtgatacatacatctaatcttattgct
gacgactggcatcagaaaactcagggaatatggttaagccctttatatccaaggctacct
cagggaacaagtggttctgctggtgaatctgaaactaattttaaatctgacctaataagt
tacttgatggcttacaattctcctacgctcaaggaatggatagatctgattcaagaacat
gatttatcagagacaagagtatatctgcttggttctacccctggacgatatcaaggtagt
gacaaagaaaagtggggtcatcttaggctgagaaagcttttgaaagagcatgctttgtca
ataccagcacaggaatcctggcctgttgttggacagttctcaagcattggttcaatggga
gctgatgggtccaaatggctatgctcagagttccaggagagtctggtggctgcaggcaga
agtgtgatgagtcttaaatgtgatgttccggttcatttggtttatcctactgtgaacaat
gtgaggcaaagtctggaaggctatcctgctggtggctcacttccatacagtatacagaca
gcacagaaacagctgtggttgcattcctattttcacaaatggtcagctgaagtctcaggt
cgaagtcatgctatgcctcacattaagacatacatgagatcctctcctgacttccagaag
attgcatggttcttagttacaagtgccaatctatctaaagcagcttggggagctctggag
aaaaatggcacccaactgatgatccgttcttatgaactcggagtcctattcttgccttca
gcatttggattggacaaaggttgctttcatgtgaaaggaaaaatgctttcagaaagtgat
aatccaggaacgtactttcctgtaccttttgacctcccaccagagcagtatggaagcaaa
gatcaaccatggatttggaatattccttacactgatgcccctgatacacatggaaatatg
tgggttccgtcatga

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