Pezoporus occidentalis (night parrot): 134174199
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Entry
134174199 CDS
T11716
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc04382
Cornified envelope formation
pocc04510
Focal adhesion
pocc04512
ECM-receptor interaction
pocc04518
Integrin signaling
pocc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134174199 (COL4A4)
04518 Integrin signaling
134174199 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134174199 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134174199 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134174199 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pocc04147
]
134174199 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pocc00536
]
134174199 (COL4A4)
Exosome [BR:
pocc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134174199 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pocc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134174199 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134174199
NCBI-ProteinID:
XP_062494894
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MAFTKDSFEWIKWLFTAAWWLLVVFSVQEIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGETGQPGPSGERGDKGPTGVPGFPGLDGIPGL
PGSGGPRGKPGLDGCNGSRGDPGFPGENGYIGPHGPYGNPGQKGEKGNSVYVSHFGKGPP
GDRGDPGPPGTPGPIGSRGTPGPSGYPGQLGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DIGLPGPPGSPLLVGPPGTQLFKGEKGQKGLPGVTGHRGPRGPKGILGRGEKGEKGIPGF
PGLRGDPGSYGPAGSPGMKGEIGFAGFPGQPGYPGIQGDPGEKGPPGPPGTVETPLLPIK
GPQGDPGFPGPAGETGSAGPIGPAGLLGRPGDDGTSLPGLPGVSGAAGPQGFQGDPGPPG
TGESIPGRSGFPGPPGLPGQPGRQGLPGPPSVICTDRGIPGEPGIKGQMGLPGRKGEKGE
KGNQGLCACSAGPPGPRGMQGLPGTQGRKGHMGYPGRDGEKGDPGLSGAMGSPGLPGPPG
SAGQHGEKGEKGDPGRVRIKGAKGERGPAGVPGFPGQRGNDGRDGELGLPGEKGAEGDSG
VPLPGDKGFPGVPGLPGVKGQMGLPGFGFPGPPGIRGSRGDFGDTGNIGPPGPKGQKGET
AYITLPYPGNPGPPGFKGVQGPKGLKGLPGHPGPNGFDGQKGHRGRPGAGIPGPEGFRGK
VGDPGDEGERGSTVDGKNGPAGPRGVDGQKGVAGDVTYGPPGIPGNRGLPGPPGAQGARG
DPGIPGPQGQPGVPGFTGAKGFRGPEGDIGAPGCPGFPGPPCDTGLPGPPGLVGVMGLPG
PQGLPGFKGQRGDRGLAGPPGIKGLKGSPGSQGPPGPPGSRGLPGLPGNKGPPGFPGKAG
SKGIQGPQGFPGLPGTQGPMGISGVKGEEGEMGPPGPSGECGDMGIKGERGPPGDSGCIN
MHLEKGQNGEPGFPGENGFRGERGEKGNTGFRGTPGFPGKNGVPGLPGDHGDTGLMGFPG
SQGFPGPKGLKGITGFQGQPGDQGDHGLPGIPGNPGPPGPKGSKGKRGDPTPLTGTHGPK
GHTGDPGLPGLHGFPGDKGSPGIQGQPGRPGSKGDPGNPGIPGLPGATGPQGLPGEPGEK
GKHGILGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYSGEFG
PKGQRGEPGWPGISIPGPPGERGFPGFPGRRGPVGPTGPMGRSPDSASPGPPGDQGPPGL
DGIRGHPGNPGPPGETIFVRGDPGDTGHRGAPGNPGQRGRQGARGPPGNEGREGLKGPMG
SHGPQGPPGATGQPGDEGLQGKPGPRGPTGDPGEPGKTDDSCPTIPGPPGEAGQRGDDGS
AGLPGPIGHPGPQGQKGEEGSCGLPGQDGLPGVPGPPGDQGHIGQQGYAGPRGPPGQTGI
PGPPGPHIRSASGFLLVLHSQSDKEPLCPHGMPKLWTGYSLLYLEGQEKAHNQDLGLAGS
CLPLFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIQPYISRCAVCEAP
AQAVAVHSQDQSIPPCPRNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFI
ECQGQRGTCQFFANEYSFWLTTVVPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacaaaggattcatttgaatggattaagtggcttttcacagctgcctggtgg
ctgctagttgttttttcagtacaagagattgatgggggaggatatgcatatattgaccca
tgtggaggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcaa
cctggtgagctgggagctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggacagagaggtgagactgggcaacctgggccatctggagaaaga
ggtgataagggcccaactggagtcccaggatttcctggtttagatggcattcctggatta
ccaggaagtggaggacccaggggcaagcctggtttagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaaatggttatattggaccacatggtccttatgggaatcca
gggcaaaaaggagaaaaaggaaattcagtgtatgtttcacattttggaaaaggacctcca
ggagatagaggtgatcctggaccccctggcacgcccggacctatagggtcgagaggtaca
ccgggcccatctggatacccaggccaactaggcttgcctggtattccgggttaccctggt
ttgccaggtgaacagggaaatcctggtattggagtggacggacaaaagggggagccgggt
gacattggacttcctgggccacctgggtcaccactgttagttggacctcctggaactcag
ctcttcaaaggagaaaagggccaaaaaggactacctggggtaacaggacacagaggacca
cgtggaccaaagggtatacttgggagaggagaaaagggtgaaaaaggcattcctggattc
cctggattgcggggtgatcctggttcttatggacctgcaggttctcctggaatgaagggg
gaaataggatttgctgggtttcctggacaacctggctacccaggcatacagggggatcca
ggagaaaaaggccccccaggtcctcctggaactgttgaaactccgctgcttcctataaaa
ggtccacaaggagatcctggatttccgggtcctgctggtgagacagggtcagctggacca
attgggcctgcaggcctgctgggaagaccaggagatgatggaacaagtctgcctggcctg
ccaggagtaagtggagcagcaggacctcaaggttttcaaggtgaccctggtcctcctgga
acaggtgaatcaatcccaggaagatctggatttcctggaccaccaggcctaccaggacag
ccaggaagacaaggcttacctggaccacccagtgtgatctgtactgacagagggatccct
ggagaacctggaataaaaggtcagatgggacttccaggaagaaaaggggaaaaaggagaa
aagggaaatcaaggcctctgcgcttgtagtgctggtcctcctggtccacgtggaatgcaa
ggacttccaggtactcaaggaaggaaaggacatatgggataccctggaagagatggagaa
aagggtgacccaggcctatctggtgcaatggggtcaccaggactccctgggccacctggt
tctgctggacaacatggtgaaaaaggagagaaaggtgatccaggaagagttagaataaaa
ggagcaaagggtgaaagaggtcctgctggggttccaggatttccaggtcaaagaggtaat
gatggccgagatggggaactaggattgcctggggaaaaaggagctgagggtgattctgga
gtaccactgccaggtgataaaggattccctggggtcccaggccttcctggggtaaaagga
caaatgggattgcctggttttgggtttcctggccctccaggaatcagaggcagccgtgga
gactttggtgatactggtaatattgggccacctggtccaaagggccagaaaggtgagact
gcctacattacattaccttaccctggaaatccaggtcccccaggttttaaaggcgttcaa
ggaccaaagggtttaaaaggactccccggtcatccaggaccaaacggctttgatgggcaa
aaaggccatcgaggcaggccaggagcaggaatccctgggccagaaggctttcgaggcaaa
gttggtgatcctggtgatgaaggtgaaagaggatctacagttgatggtaaaaatggccct
gcaggtccacgtggcgtagatggtcagaaaggtgttgcaggtgatgtcacatatggtcct
ccaggaatcccaggcaacaggggactgccaggaccccctggtgcacaaggagcaaggggt
gatccaggcattcctgggcctcaaggacagcctggtgtcccaggatttacaggtgccaaa
ggttttagaggaccagaaggtgatataggagcaccaggctgtccaggcttccctggtcca
ccatgtgacacaggcttaccagggccaccaggacttgtaggtgtcatgggcctgccagga
cctcaaggcttaccaggctttaaaggtcaaaggggggacaggggcctagctgggccacct
ggaatcaaaggtctcaaaggctctcctggctcacaaggtcccccaggtcctccaggctct
cgaggacttccaggacttccaggcaataaaggaccacctggtttcccaggaaaagcagga
agcaaagggattcaaggaccccaaggattcccaggactcccaggaacacaaggcccaatg
gggatctctggtgttaaaggagaagaaggagaaatgggtccacctgggcctagtggagaa
tgtggggatatgggaataaaaggtgaaagagggcctccaggagacagtggctgtattaac
atgcatcttgagaaaggacaaaatggggaaccagggtttcctggtgagaatggatttaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcaccccaggatttccagggaag
aatggtgtcccaggactgcctggtgaccatggtgacactggattgatggggtttccagga
tcacagggtttcccaggaccaaagggcttaaaaggaattacgggttttcaaggacaacca
ggtgaccagggtgaccatggcttaccaggaatccctggcaatccaggaccgcctggccca
aaaggatccaaaggcaagagaggtgaccccactcctctgactggtacacatggtccaaaa
gggcatactggagatccaggattaccaggactccatggattcccaggagacaagggttca
ccaggtatccaagggcaaccaggaagaccaggatccaagggtgaccctggaaacccagga
atacctggacttccaggagctacaggtcctcagggattgccaggagaacctggagaaaaa
gggaaacatggaattttgggacctccaggactgcaaggattagctggatcccaaggcaga
aaaggtcttcctggactgcccggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcaaagtgaaacagggcctccaggatactcaggagaatttgga
ccaaaaggacagagaggtgaacctggatggcctggtatttctattccaggccctcctgga
gaaagaggattcccaggattcccaggtagaagaggacctgttggacccactggacctatg
ggaagatctcctgatagtgcttctcctggtcctccaggtgatcagggaccacctggttta
gatggcatcagaggtcatcctgggaatcctggtcctcctggagagactatctttgtgcgg
ggagatccaggtgataccggtcatcgaggggcacccggtaatcctgggcagcgagggcga
cagggagccagaggtcctccagggaacgaaggaagagaaggcctaaaaggccctatggga
agccatggcccacaaggtccacctggtgctacaggacaaccaggagatgaaggtcttcaa
ggaaaacctggtcccagaggtcccacaggtgaccctggtgaaccaggaaaaacagatgat
tcgtgccctacaatcccagggcctcctggggaagcagggcaaagaggagatgacggctct
gcgggattaccagggcctataggacatcctggacctcaaggacaaaaaggtgaagaaggg
tcatgtggcctgccaggtcaggatggcttacctggggtacctggaccaccaggtgaccaa
ggacatataggacagcaaggatacgctgggccacgaggtccacctggccagactggtatc
ccaggaccaccaggcccccatattagatctgcaagtggattcttgcttgtccttcacagt
caatcagacaaagaaccactctgtccgcacgggatgccaaaattatggactggctatagt
ctgctgtacctggaaggacaagagaaagctcataatcaagatcttggtctggcaggatct
tgtcttcctttgtttaataccatgccatttgcttactgtaatatcaaccaagtttgttac
tatgccagtcgaaatgacaagtcttactggttgtcgagtgctgctcctttaccaatgaca
ccactctctgaagaagaaatacagccatatataagcagatgtgctgtatgtgaggctcca
gcccaagcagtagcagttcacagccaagatcagtcaattcctccctgcccacggaactgg
aggagtctttggataggatattcctttttgatgcacactggatctggtgatcagggtggt
ggacagtcccttatgtcacctggaagttgcctagaagacttcagatcagcaccattcatt
gaatgccagggtcagcggggaacatgccaattttttgctaacgaatacagtttctggtta
acaactgtggtacccgaattgcagtttgcatcagctcccctatcaggaactcttaaagaa
ggacaagagcagagaaaaaaaatcagtagatgccaagtatgcctgaaacatggctaa
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integrated database retrieval system
