Pezoporus occidentalis (night parrot): 134174800
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Entry
134174800 CDS
T11716
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134174800 (PTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
134174800
NCBI-ProteinID:
XP_062496048
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MASAGNASEPEISSSAGGGGHPGRAARSGGGWRRRTGGNRRAPAPDREYLQRPSYCDAAF
ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAAN
LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALRQHLD
SALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEGAK
LQSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAEVGHGYMDRPCLNPA
DPDCPITAPNKNSTKPLDVAPVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNSTQKVL
SFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVTRVIQIEPQAYVENDNTCYSPPPPYSSHSFAHETQITMQST
VQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNFSCQSPESTSSTRDLLSQFSDSSIH
CLEPPCTKWTLASFAEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTRVRDGLDLTDIV
PRETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQHLLYELHRSFSNVTYVLLEEDRQLP
KMWLHYFRDWLQGLQDAFDSDWESGKITYNNYKNGSDDAVLAYKLLVQTGNRAKPIDISQ
LTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL
RIPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYTSLGIASYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHVALAFLTAIGDRNRRAVLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPTNGQTRLPTPSPELA
PSIVRFALPPTHTHNGSDSSDSEYSSQTTVSGISEELHQYEATQGPGAPVHQVIVEATEN
PVFARSSVVQPEAQHQSSPRSQLNPEPGTQQTWRQGRQAKREAREGQRPPPYRPRRDAFE
ISTEGHSGPSNRDRLGHKTRSHNIRSPAFSTLGATGPAYCQPITTVTASASVTVAVHPAV
HSRSSRGGSFPSYEGYHEADHGPFEDPHVPFNVRCERRNSKVEVIELQDVECEERTPSNS
SQ
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccggtaacgcttcggagccggagatcagcagcagcgcgggcggcggcggc
caccccggccgggcggcgaggagcggcggcgggtggcggcgaaggaccggagggaatcgg
cgagccccggcgcccgaccgggagtatctgcagcggccgagctactgcgatgcggctttc
gccttggagcagatctcaaaggggaaggcgacaggacggaaagcgccgctgtggctgcga
gcaaagtttcagagactgttgtttaaactgggctgttacattcagaaaaactgcgggaag
ttcttggttgttggcctcctgatttttggggctttcgctgtaggattaagggcagctaat
ctcgagaccaacgtggaagagctgtgggtggaagttggtggacgagtgagtcgggagtta
aattacacacgacagaagattggagaagaggccatgtttaaccctcagctcatgatccag
actccacaggaagatggtgctaatgtactaacaacagaagcactccgacagcaccttgac
tctgcacttcaggccagcagagtacatgtctatatgtacaacagacagtggaaattggaa
catttgtgttacaaatcaggagaactcatcacagaagcaggttacatggaccagatcata
gaatatctttatccttgcttaattatcactcctttggactgcttctgggagggagcaaag
ctacagtcaggaactgcctatcttttagggaagcctcctttacagtggatcaactttgac
cccttagaattcttggaagagttaaagaaaataaactaccaagtggagagctgggaagaa
atgctgaataaagcagaggttggtcatggttatatggatcgaccctgcttgaatcctgct
gatcccgattgcccaattacagctcccaataaaaattccactaaacctcttgatgtagcc
cctgttttgagtggtggatgctatggactgtcaagaaaatacatgcattggcaagaggag
ttaattataggtggtacagtcaagaacagttctggtaaacttgtcagtgcccaggctttg
caaaccatgtttcagttaatgactcctaagcaaatgtatgagcacttcaaggggtatgaa
tatgtttcacatatcaactggaatgaggataaggcagcagcaattctggaagcctggcag
aggatgtatgttgaggttgttcatcaaagtgttgcacaaaactctactcagaaggtgctc
tcctttactacgaccaccctggatgacatcctaaagtcattttctgatgtcagtgttatc
agagtagctagtggctacttactaatgcttgcctacgcctgtttaacaatgctgcggtgg
gactgtgccaagtctcagggtgccgtggggctggcaggagtcttgttggttgcactctca
gtggctgcaggattgggcctgtgctcattgattggaatttcctttaatgctgccacaact
caggttttgccttttcttgctcttggagttggtgtagacgatgttttccttctggcacat
gcatttagtgaaacagggcagaataagagaattccatttgaggacagaacaggtgaatgt
ttgaagcgaacaggagcaagtgtagcccttacatctatcagcaatgttactgctttcttt
atggctgccttaatccctattcctgctttacgagcattttcactccaagcagcagttgtg
gtggtattcaactttgctatggtcctgctgatttttcctgctatcctgagcatggacctt
tatcgtcgggaagacaggagactggatatattctgctgttttacaagtccgtgtgttact
agagtgattcagattgagcctcaagcatatgtggaaaatgacaatacctgctacagccct
ccacccccatacagcagtcacagttttgcacatgaaactcaaattacgatgcagtccaca
gtgcagttgcgcacagaatacgatcctcatacgcaggtgtactacaccacagcagagcct
cgttcagaaatatctgtgcagccagtaacagtgacacaagataatttcagctgccagagc
ccagaaagcacaagctcgacgagggatttgctttcccaattctcagactccagcatacat
tgccttgagccaccctgtacgaagtggacactcgcatcttttgcagaaaagcattatgct
ccattcctcctaaaaccaaaagctaagattgtggttatttttctttttctgggtttgctt
gggctcagcctttatggaactacccgagtgagagatggactagatctcacagacattgta
ccacgggaaacacgggaatatgactttattgccgcacaattcaagtacttttcattctac
aacatgtatattgtgacacaaaaagcagactatccaaatgtccagcacttactgtatgaa
cttcacagaagtttcagcaatgtgacatatgttttattggaagaagataggcagctcccc
aaaatgtggttgcactactttcgagactggctgcaaggacttcaggatgcatttgacagc
gattgggaaagtgggaagatcacttacaacaattacaaaaatggatctgatgatgctgtt
ttggcttacaaactcctggtacaaacaggcaacagagcaaagcccattgacatcagccag
ttgactaaacagcgtctggtggatgcagatggaatcattaacccaaatgctttctacatc
tacctgacagcctgggttagcaatgaccctgtggcttatgctgcctcgcaagccaacatc
cggcctcaccgcccagagtgggtccatgacaaagcagactatatgccagaaacaagactg
agaattccagcagctgagcccatagagtatgctcagtttcctttctacctcaacggattg
cgtgaaacttctgactttgtggaggctattgagaaagtgagagctatctgtaataactac
accagtctggggatcgccagctacccaaatggttacccgtttctgttttgggagcagtac
attgggcttcgtcactggctgctcttatcaattagtgtggttttggcttgcacatttctg
gtgtgtgccctcttcctcctaaacccctggacagctgggatcattgtggtggtgctggct
cttatgactgtggagctgtttggcatgatgggtctaattggaataaagctgagtgcagtt
cctgtggttatcctgattgcttctgttggcattggtgtggaattcactgttcacgttgca
ttggcatttttaactgccataggagacaggaaccgcagggctgtccttgcattggaacac
atgttcgcaccagtgctggatggggctgtgtccactctgcttggagtgttaatgctcgca
ggatcagagtttgattttattgtcaggtatttctttgctgttttggcaatcttaaccatt
ctgggagttcttaatggattggtgctgcttcctgttcttctttcgttctttggaccatac
cctgaggtttctccaaccaatggacaaaccaggttgcctacaccgtctcctgagctggcc
cccagcatcgtgaggtttgcactgccacccacgcacacacacaatgggtcagattcctct
gattcagagtacagctctcaaaccacagtgtccggcatcagtgaagagcttcatcagtat
gaggccacacaaggccctggcgcaccagtccaccaagtaatagtggaagccactgagaat
cctgtctttgcaagatccagtgtggttcagccagaggcacagcatcagtcgagccccaga
tcacagttgaatccagagcctggcacacagcagacatggcgtcagggcagacaagctaaa
cgggaagcgagggaagggcagcgaccacctccttaccgccctcgcagggatgcgtttgaa
atctctactgaagggcattcaggacccagcaacagggatcgcttgggccacaagactcgt
tctcataacataagaagcccagcgttcagcaccctgggcgccacaggaccagcatactgc
cagcctatcactactgtgactgcctcagcttcagtgactgttgctgtccaccctgcggtg
cacagccgcagctctcggggagggagctttccgtcctacgagggataccatgaagctgac
catgggccatttgaggacccccatgtgccttttaatgtgcggtgtgaaagaagaaattct
aaagtagaagttatagaactgcaagatgtcgaatgtgaggaaaggacacccagcaacagc
tcacagtaa
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