Pezoporus occidentalis (night parrot): 134175366
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Entry
134175366 CDS
T11716
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
pocc Pezoporus occidentalis (night parrot)
Pathway
pocc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pocc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134175366 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pocc03019
]
134175366 (NUP188)
Messenger RNA biogenesis [BR:
pocc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134175366 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
134175366
NCBI-ProteinID:
XP_062497208
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MAAGGPRARSSRQLWRVLLGKSSLREPAQIESELNNHLQRLSEGLSYYKPPSTSSAEKVK
ADKSVNAPLKELGLRASKFLGLDEEQSVRLLQCYLQEDYRGTRDSLPTVSQDERQSQALM
LKLADYYYDERICILRCVLQLLTYFQDERHPYMAQYFQCVEKLDKELVPNYWKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQAMLLEVIFLYHAYFEMSPDDLLAFAKKFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHKRALDGRTDRHKLANKSIH
QEMDNQLLQLGDVSHHAPVLLAWALLRHTLNPEESTNVIRRMGSTAIQLNVFQYLTKLLR
SLNSGGKNCATSTACLCIYGLTSFVLTSLELHTLGNQQDIIDVACEVLTVASIPQLFWKT
EPTAGLGIILDSVCGLFPNQLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYMEQYKHKPP
DVISHEDGTLWRRQTPKLLYPLGLGQTNLRIPQGTVGQVALDDRAYVVRWEYSYSSWTLF
TCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLTT
VISPPVDVIASCVNCLSVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHVISAEGMNAGG
YGNLLMSIEQPQGEYNVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKWR
YNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIMG
IGVDTIDMVMTSQCNSDESQGHGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQH
GAHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLIH
LQSKMEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVLQ
LIDTKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPPP
SESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLAD
HVAETEGSSCAFITEYQMLISAWRMLLIISTSHADIMHLTDSAVHQQLFLDVLNGTRVLL
LVPMSVSCLQLGSMLCTLLLILLKQWKSELGSVDSIINSLTQILEGVLQADQQMMEKTKA
KVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKDS
METDDSSRVKHKDQRDGQVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEIS
LRVKQNLHFTEASLHLLLALARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFTKEWHFHLPQLMKDMQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPASVTPRVQRNPQAPSKHPSPESEAAEQKALLTVQYSLLKILSKCLAALRHFT
PDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSSSKMGPEGQEPLIQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggccgcgcgcgaggagcagcagacaattatggagagttcttctgggt
aaatcatctttaagagaaccagcacagattgagtcagagttgaacaaccacttgcagaga
ttgtcagagggactttcatattataagcctccaagcacatcttcagcagaaaaagtaaaa
gctgataaaagtgtaaatgctccactgaaagagctgggcctgagagccagcaagtttttg
ggtctggatgaagagcagagtgtgcgtttgttacagtgttatctccaagaagattataga
ggaacaagggactccctgccgacagtttctcaggatgaaaggcagagtcaggctctgatg
ctgaagcttgctgactattactatgacgagaggatctgcattctgcgctgtgtcctccaa
ctactcacttattttcaggacgagaggcacccttacatggctcaatacttccagtgtgtt
gaaaagttggacaaggaactagttcctaattactggaaacagtttgaagcactgtacaaa
gcagaagctcctacatgggaaacacatggaaatctcatgacagaacgccaggtttcccgt
tggtttgtgcaatgcctccgtgaacaggccatgctcctggaagtcatcttcctctaccat
gcatactttgagatgtcacctgatgatcttctggcatttgcaaagaagttcaaagaacag
ggatttggcactagacaaaccaacagacatttggtagatgagagcatggatcacctggtg
gatcgcattggctactttagtgctcttattctggtggaaggcatggaaatcgactccctc
cataagcgtgctttggatggcaggactgacaggcacaaattagccaataagagcatccac
caggagatggacaatcaactgctgcagttaggagatgtctcgcatcatgctcccgtgctt
ttggcctgggccctgctccgtcacactctaaacccagaggagtcaacaaacgttatcaga
agaatgggcagcactgccatccagctgaatgttttccagtatctgacaaagcttctgcga
tcgctgaacagtggggggaagaattgtgctaccagcactgcttgcttgtgtatttatgga
cttacttcctttgtcctgacatcactggaattgcatacattgggcaatcagcaggatata
attgatgttgcatgtgaagttctgacagttgccagtattcctcagctattctggaagacg
gaacctactgcaggtctgggtattatcctggacagtgtgtgtggattgtttcccaatcag
cttactcctcttcttcagctgctccaagccctcgtgtctgataaatctactgcaaaaaag
gtgtacagcttcctggataaaatgtccttctacatggaacagtacaagcataaacctccg
gatgtgatctctcatgaagatggcacactttggcgcagacagactccaaagctcctctat
cctcttggactaggtcaaacaaacctgcggatacctcagggaacggtgggccaggtggca
ctggatgatagggcttatgtggtacgatgggagtattcctacagtagctggacactgttt
acctgtgagattgagatgctgcttcatgttgtgtcgacagcagatgtgattcagcattgc
cagagggtcaagccaataattgacctggttcataaagtcatcagcactgatgtatcaata
gcagattgccttctgcccatcacatcacggatttacatgctcctgcagaggctaacaact
gtcatctctccccctgtggatgttattgcttcttgtgtcaattgtttgtcagtactggct
gctcggatgcccgccaaggtctggactgaccttcaccatacgggtttcttgccgtttgtt
gccaacccagtgtccagtatgaatcacgttattagtgcagagggaatgaatgctgggggc
tatggaaaccttctgatgagcatagaacagcctcagggcgagtacaatgttaccatctcc
ttcctgaacctgataacaactcttgtccggggacaacttggtagcactcagagccaagga
ctcgtgccctgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatggcgt
tacaactctcatggagtgagggagaaaattgggtgcctgattctgcagttgatccatgct
atactgaatttgtgccctgaaatggatcctcgcagtagcaatgcccccagccttcagtcc
ctgtgcatcttcagcctggccaacactgaagcagggcaagctgtcattaacatcatggga
attggtgtggacactattgatatggtaatgacctcccagtgtaacagtgatgagtcgcaa
ggccacggtcaactgctcatccaaacagttaaactggcgttctcagtcaccaataatgtc
atcaggttgaaacccccctctagcgtggtatctccattagaacaggcgcttactcagcac
ggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaggcatgac
cctgcgcttccacgcctggccatccaactgctcaaacgactggctacggttgctcccatg
tctgtttatgcctgccttggtagtgatgctgctgccatccgtgatgccttcctcatccac
ctgcagagcaagatggaggacatgcgtattaaggtcatgatactggagttcctcacagtt
gcagtggagacacagcctgggctcatcgagctcttcctgaacttggaagtgaaggatggc
agtgatgggtcaaaggaattcagcttaggggagtggagttgcctccaagtagtgttacag
ctgatagataccaaacaacaggagaggtactggtgccctcccctcttgcaccgtgctgcc
attgccttcctgcatgctctgtggcaagaccgtcgcgatagcgccatgctggtgctgagg
acaaagccaaagttttgggaaaatttgactaatcccctctttgggaccctccctccgcct
tcagaatcatcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatctgt
ttggagatctactatgttgtcaagggctcactggatcagtccctgaaggacacactgaag
aacttctccaccaaaaagcgtttcgcctactggtcagagtatgtgaagttactggcagat
catgtggcagagacagagggcagcagctgtgccttcataacagagtatcagatgctcatc
tcagcctggcggatgctgctcatcatctccacgagccacgcagatatcatgcacctgact
gattctgcagttcatcagcagttgtttctggatgtgctaaatggcaccagagttttgctc
ctagttcccatgtcagtatcctgtctgcagctggggtctatgctatgtacccttcttctg
atcctgctcaaacagtggaagagcgagctgggatctgtggatagcatcataaactccttg
acgcagattctggagggggtgctccaggcagatcagcagatgatggagaaaaccaaagcc
aaagtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaacgagatc
cctcagtactcccagctggtgctgagtgtgtgtgaaacactccaagatgaggtcattgcg
ctcttcgatcagactcgacacagcctgaccttgggagatgccacggatgacaaggacagc
atggaaacagatgactcttctcgagttaaacacaaagaccagcgggatgggcaggtgtgt
gttctgggtctgcatctggctaaagagctctgtgaggttgatgaagatggagactactgg
ctgcagattactaggaaggtccctgtgcttcccactatctttgccgcattggagatcagc
ctgagagtgaaacaaaacctgcacttcacagaggcctcattacatttactgctggcctta
gcaaggactcaacagggagcagcagctgtggctggagctggtgtcacacagagtgtctgc
ctgcccctgcttagcgtgtaccagctcagcactaacggagccattcagacgtctgcttca
tcacgcaagtctctggatgccccctcctggcctggggtctatcgtctctccatgtcactg
atggaacgcctccttaaaacactcagatacaacttcctgacggaagcactggacttcgtt
ggtgtccatcaagagaggattcttcagtgcctcaatgcagtgcggacagtgcagagcttg
gcctgcctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttcaca
aaagaatggcatttccacctgccacagcttatgaaggacatgcaggtgaatctgtgttac
ctgtgccaagcctgtacctccctccttcacagccgcaaaatgctccagcactacctgcag
acaaaaaatggtgattcccttccagcaagtgtgaccccacgagtgcagcgaaacccccaa
gccccctccaaacacccgagccctgagtcagaggcagcagagcagaaagcactgcttaca
gtgcagtacagcctcttgaagatcctcagcaagtgtcttgctgccctgcgccatttcacc
cctgatgtctgccagatcctccttgaccagtcgctggaccttgctgagtacaacgtgctc
ttcgttttgagtttcaccacaccagcctttgattccgatgttgcaccttcctttgggacc
ctccttgccacagtcaatgtggcccttaacatgctgggagagctggataagaagaaggaa
cctttccctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaaatctctg
ctcatgtttacaatggagaactgtttctacctgctcatctcccaggctgttcggtacttg
agagacccggcggtgcatccccgtgataagcagcgcatgaaacaggagctcagctctgag
ctgagtactctgctctccagcctgtcccgttacttccgccggggtggtccctcttccccc
gccagcggggtcctaccctctccccaagggaaatcctcctccaagatgggtcctgaaggg
caggagcctttgattcagctcgtgcaggccttcgtccgccacgtgcagagatag
DBGET
integrated database retrieval system
