Paenibacillus odorifer: PODO_00045
Help
Entry
PODO_00045 CDS
T03326
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pod03032
]
PODO_00045
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_00045
Enzymes [BR:
pod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PODO_00045
DNA replication proteins [BR:
pod03032
]
Prokaryotic type
DNA Topoisomerases
PODO_00045
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PODO_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AIQ71805
UniProt:
A0A1R0Z4R8
LinkDB
All DBs
Position
7729..10293
Genome browser
AA seq
854 aa
AA seq
DB search
MAEQNNPQVKDRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILFAMSELGMSA
DKPHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSMRYMLVDGHGNFGSIDGDMAAA
MRYTEARLSKIAGEMLRDLNKETVDFAPNYDGEENEPVVLPARYPNLLVNGVSGIAVGMA
TNIPPHNLGEVIDGVQAMIKNPDITPMELMEFIQGPDFPTAGYILGREGIRQAYRTGRGS
VTMRAKATIEENNGKARIIVHELPYQVNKARLVEKIAELVREKRIEGITDLRDESDRNGM
RVVVEMRRDVNPNVVLNNLYKHTSMQSTFGINMLAIVNNEPKILNLRDVLYHYLQHQIEV
IRRRTIFDLKKAEARAHILEGLRIALDHLDEVIALIRASRTTDIAREGLMSTFSLSLEQA
QAILDMRMQRLTGLEREKIENEYNELIVKIAEYREILANEHLVLEIISNELQDIRDRYSD
ERRTEITVGEESILDEDLIPREEVVITITHTGYIKRLPVSTYRSQKRGGRGVMGMDTKDQ
DFVEHLFVSNSHNYLMFFTDKGKVYRIKAYEIPELGRTARGTPIINLIQIEQGEKISAVI
QVEDGDSDKYLFFATREGIVKKTPLGDYNNIRKGGLIAINLREEDSLIEVKLTDGQQNLI
IGTARGMSITFSENDVRSMGRSATGVKGITLDGNDHVIGMDCVDKELEVLIVTTKGYGKR
TPAGDYRSQTRGGKGIKTINLTDKNGPVVGLKVVKKDEDLMIITTSGTLIRTSMDGISTM
GRYAQGVKLINIREDDAVATLCRADKNEEDESEEVEGLEGLEGQEGLDGQDTVEESGDID
QPEILTEDEDTDLE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaataacccacaagtcaaagatcgggacattggcgtggaaatgcgtgaa
tcctttatggattatgcaatgagcatcattgttagccgggctttgccagatgtgcgggac
ggactcaagccggttcaccgacgcattttgtttgcgatgtcggagcttggaatgtctgcg
gataagcctcataagaaatctgcaagaatcgttggtgaggttatcggtaagtaccaccct
cacggtgactcagctgtctatgaaacaatggtacggatggctcaggatttctcgatgcgc
tatatgcttgtagacggtcacgggaactttggttcgattgatggtgatatggccgcggcg
atgcggtacacagaagcccgtctttccaagattgcaggcgaaatgcttcgtgatttgaac
aaagagacagttgacttcgcacccaactatgatggtgaagagaatgagccggttgtattg
ccagcccgttatccgaatctgctcgtaaatggggtatctggtattgctgtaggtatggct
actaatattccaccgcataaccttggtgaagttatcgatggtgtgcaggcgatgattaag
aatcctgatatcacgccaatggaattgatggagtttatccaaggtccggatttccctacg
gctggatatattttgggtcgtgagggcattcgtcaggcttatcgtacgggtcgtggttca
gtaaccatgcgtgcgaaggcaacgatcgaagagaacaacggcaaggctcgcatcattgtg
catgagcttccataccaggttaacaaagcaagattggttgaaaaaatcgcagaattagta
cgtgagaaacggatcgaaggtataacggatcttcgagatgagtccgaccgtaatggtatg
cgtgtagttgttgagatgagacgcgatgttaatccaaatgtagtattaaacaatctatat
aaacatacttctatgcaatccacatttgggatcaacatgcttgccatcgtaaataacgag
ccgaaaattcttaatctgcgtgatgtactttatcattatttgcagcaccagattgaagtt
attcgtcgtcgtactatatttgatcttaaaaaagctgaagcacgcgctcatatcttagaa
ggtctgcgcattgcgcttgatcatctggatgaagtgattgcgttaatccgtgcttcgcgg
acaactgatatagcccgcgaaggattaatgagcacctttagcctcagtttagagcaggct
caggctatcctcgatatgcggatgcaacgtctgaccggtctggaacgggaaaagatcgag
aacgaatataacgaattgatcgttaaaattgcagagtaccgtgaaattctggctaacgag
catcttgtactggaaatcatcagcaacgagctgcaggatatccgtgatagatattctgat
gaacgccggacagagattacggttggtgaagaaagtatcctggatgaagaccttattcca
cgtgaagaggttgttatcactattacacatacaggatatatcaaacgtctacctgtcagc
acctaccgcagtcagaagcgtggtggtcgcggagtcatggggatggacaccaaggaccag
gattttgtggagcatctcttcgtgagtaactctcataactatctgatgttctttaccgat
aagggtaaagtataccggattaaagcttatgagatcccagaattgggccgtacagcccgg
gggacaccaatcatcaacctgattcaaatcgaacaaggtgagaagattagtgcggtaatc
caagtggaagatggcgatagcgacaaatatttgttctttgctacccgcgagggtatcgtg
aagaagacgcctcttggggattataacaacatccgtaaaggcggtcttattgctattaat
cttcgtgaagaagattccctgatcgaggttaagctgactgatggacagcaaaatctcatt
atcggtacagctcgcggaatgtcgattacgttctcagagaatgatgtgcgttctatggga
cgtagcgcgactggcgttaagggcattacgcttgacggtaatgaccatgtcattggtatg
gactgtgtcgataaagagcttgaggttctgattgttactaccaagggttatggtaaacgg
acaccagccggtgattatcgttcccagactcgtggtggtaaagggatcaagaccattaat
ctcacagataagaatggtcctgtagtgggtcttaaggtcgttaagaaggatgaagactta
atgatcattacgactagcggtaccctgattcgtaccagcatggatggaatctctactatg
ggccgttatgctcaaggggttaagctgattaacatccgtgaggatgacgcagtagctacc
ctgtgtagagctgacaagaatgaagaggatgaatctgaggaagtggaaggtctggaaggc
ttggaagggcaagaaggcctggatgggcaagatacagtcgaggaatctggcgatattgat
cagcctgagatcctgactgaggacgaagacactgacttagaatag
DBGET
integrated database retrieval system
