Paenibacillus odorifer: PODO_01135
Help
Entry
PODO_01135 CDS
T03326
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K08693
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:
3.1.4.16
3.1.3.6
3.1.3.5
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00230
Purine metabolism
pod00240
Pyrimidine metabolism
pod00760
Nicotinate and nicotinamide metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01232
Nucleotide metabolism
Module
pod_M00958
Adenine ribonucleotide degradation, AMP => Urate
pod_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PODO_01135
00240 Pyrimidine metabolism
PODO_01135
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PODO_01135
Enzymes [BR:
pod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
PODO_01135
3.1.3.6 3'-nucleotidase
PODO_01135
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
PODO_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
SLH
Metallophos
NadN_nucleosid_C
YL1_C
Motif
Other DBs
NCBI-ProteinID:
AIQ71993
LinkDB
All DBs
Position
236235..240581
Genome browser
AA seq
1448 aa
AA seq
DB search
MGWKTRWNKPIASVLATAVLSLQVFGGIGLGAAWGTDKAEAASAATAKLRLMSTTDVHTN
VYGWDYFKNAASVTVGLDRTASLVKQAKSEEPNTLLLDNGDLIQGTPLGTYVAKESDLKD
PTNVTDIHPMIAAMNAMGYDAATFGNHEFNYGLQFLDRTINGSTGNEMTTGANFDYVNAN
IYKMDGVTNAYQPYVILPKKVTDSNGDEQTIQVGLIGLVTPQIMEWDKVNLEGKVVVEDI
AKTAEKFVPEMKAKGADVIVAMAHTGFDVNAVTGDGSENDINALSKVPDIDAITFSHTHK
VFPTGNNDTLDASFKDPVTKQPYANEKAVIDNVNGHINGTPAVQAGYGGAYLGLIDLNIV
YDGNDWTVDKQSSKASARSIYKTENKVNIPLVEPDAAVDAAVAAAHEATIAYTGQKLGVT
TAPMNSYFAMVQDDPTVQLVTYAQKWYVQNYIDINVPQYKDLAILSVGAPFKAGRNGPDE
YTSIDKGDLTIRSASDLYLYDNTLKAIKVKGSVVKEWLEMSAGAFNRIKPGISTPQSLLN
TKFSVFNFDVIDGVQYKIDVTKNAKYNPDGTINDASSSRVTDVTYNDQPLDLDQDFIVVT
NNYRASGGGNFPGVKGAELVVDSQDENRQVLMDYISEAGTIDPTADGNWSLAPIKGNVDV
TFTTTPKAANVLPANISDTGQQDNKGFGIFKLDLSVKTPAPTEDVEVHLLGINDFHGQLD
TVSTVNNKSVGTAAYLATYLKATRAKYENSLLFHNGDSVGASAPVSSLERDEPTHAWMNM
MKFDVGSLGNHEFDQGVDALMTQLYGGIDPKDNKVNHAGSDFDYVNANAVDAKTGEPIIN
PYVIKEVGGVKIGFIGLVTKSTPSKVAPSGTAGVHFLTPEEEVAAVEKYAKELQSKGVET
IIVLAHDPATTKDGVTTGEAADLANALPAESPVDVIVAGDNHALANGTVNGKLIVQAYSY
GTAFEDIKLIIDPKTGDVKDKSAVVTSTFHEGVTPDPESVALVNAYLEKHPELTQPVGTT
DGTITRTDAYNNEAALGNLIADSMRNADFGDGAKAADFAFMNPGGIRADLPKGPVTFGDL
AKIQPFGNTLVKLTLTGAQIKTLLQQQWNVKADGTPDIKTLQISGLKYTANMYLPVADRI
ASLTLTDGTPINPTQKYTAVVNNFMAAGGDNYKVLTQASDSLAGPIDLDVFYDYIVKTFN
GKEIKAAIEGRIINKLKADSGSGNGSGGGSTGVTPTPTPTAKPTATATPAPSTAPTVTPA
PTTAPAANFKDLGKVAWAQEAIEALAAKGILKGLDANTFAPTKTVTRAEFVTMLVRALNL
TGSATTSSFNDVKQGVWYTDSIALAVKAGLVQGSGNGKFEPGREVTREEMAIMVANALKD
KLQPIDKNAALGKFADKSSIAPYAQEAIAQLTQLGIVNGVDGGKFAPKGIANRAQAAVII
YRMLGQVS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgggatggaagacacgatggaataagccgattgcttctgtattagcaactgcagtgctt
tctttgcaggtgtttggaggtattggtttgggtgcagcttggggtacagataaagctgaa
gcagcatccgcagccacagccaaactccggctgatgagcacgacggacgtgcacaccaat
gtctacggctgggactattttaagaatgcagcttcagtaactgtcggtcttgaccgcaca
gcaagcttggtgaaacaagccaaaagtgaagaacccaacaccctcctactcgacaatggg
gacttgattcaaggaactccgctaggtacttatgtggcgaaggaatcggatctgaaggac
cctactaatgttactgatatccatccgatgattgcagccatgaacgctatgggatatgat
gctgcgacttttggtaatcatgaattcaattatggattacaatttttagatcgtacgata
aacggtagcactggtaatgagatgactactggagccaattttgattatgtgaatgcgaat
atatataaaatggatggcgttacaaatgcttatcagccttatgttattcttcctaagaaa
gttacggatagtaacggcgatgagcagacgattcaagttggtctaatcggcctagttact
cctcaaatcatggagtgggacaaggttaatctggaaggcaaagttgtcgttgaagatatt
gctaaaacggcagaaaaatttgttcctgaaatgaaagctaagggagcagatgttattgtt
gctatggcccatacggggtttgatgttaacgccgttacaggagacggttctgagaatgat
attaacgctttgagtaaggttcctgatattgatgcgattacgttctctcatacgcataag
gtattcccaacagggaataacgatacgttggacgcgtcgttcaaagatcctgttactaaa
caaccgtatgcaaacgaaaaggctgtgatcgataatgtgaatggtcacattaacggtacg
cctgctgtacaagctggttacggcggagcttatttgggtctaatcgatctgaacattgta
tacgatggtaatgactggacggtagacaagcaaagttcaaaagcttctgctcgttctatt
tataagacagagaataaagtgaatataccactggttgagcctgatgcggctgtagatgca
gctgttgcagcagcacatgaggctactattgcttatactggacaaaagctgggtgttaca
acagctccgatgaacagctatttcgcaatggttcaggatgatcctacggttcaacttgtt
acgtatgcacaaaagtggtacgttcagaattatattgatatcaatgttcctcaatataag
gaccttgccattcttagtgttggtgctccttttaaagcaggacgcaacggacctgatgag
tacaccagtattgataagggtgacttgactattcgtagcgcaagtgacctgtatttatat
gataatacccttaaagcaatcaaagttaagggttctgttgtgaaagaatggttggaaatg
agtgcgggcgcatttaaccgcatcaaaccagggatctcgactccgcagtctctgttgaat
acgaaattttcggtttttaacttcgatgtaatcgatggggttcaatataaaattgatgtg
acgaaaaacgcgaagtacaatccggatggtacgattaatgatgcttcttcgagtcgtgta
acggatgtcacttacaatgatcaacctttagatctagatcaggatttcattgttgttact
aacaattaccgcgcaagtggtggcgggaacttcccgggtgttaaaggtgcagagctggtt
gtagactctcaagatgagaatcgtcaggttctgatggactacatcagtgaagctggtacg
attgatccaactgctgatggtaactggtccttggcacctatcaaaggcaatgttgatgtt
acatttacaacaacacctaaagcggcaaatgtactcccagcgaacatttccgatactgga
cagcaagataataagggctttggaattttcaagctagatctaagtgtgaagacacctgca
ccgacggaagatgtggaggttcaccttcttggaattaatgacttccacggtcaactcgac
actgtttctacagtgaacaataagtctgtaggcacagcagcctatctcgcgacttatttg
aaagcaactcgtgcaaagtatgagaactcattactcttccataatggtgactccgttgga
gcatccgctccagtatcatcccttgagcgcgatgagccgactcatgcttggatgaacatg
atgaaatttgatgtgggttctcttggtaatcacgaatttgaccaaggtgttgatgcactg
atgacacagctttatggtggtatcgaccctaaggataataaagttaaccatgctggatct
gattttgattatgttaatgcgaatgcagtggatgccaaaactggcgagccaattattaat
ccttatgtaatcaaagaagtaggcggtgtgaaaattggctttattggtcttgtaacaaaa
tccacaccaagcaaggtagcgccttccggtacggccggcgtgcatttcctcacgcctgag
gaggaagtggcggctgtggagaaatacgctaaggagcttcaatctaaaggtgttgagacg
attatcgtgcttgcacatgatcctgcaacgaccaaagatggtgtgactacaggtgaagcg
gctgatctggccaatgcgcttcctgcggaatcccctgttgatgttatcgttgctggtgat
aaccatgcacttgcaaatggaacagtaaacggcaagctgattgtacaagcttattcttac
ggtacagcatttgaggatatcaagttgatcattgatcctaaaacaggtgatgtgaaggat
aagtctgctgtggtaacttccaccttccatgagggtgtaacaccagatccggaaagtgtg
gcactggttaatgcttaccttgagaagcatcctgagcttacccaaccagtaggtacaacg
gacggaactatcactcgtaccgatgcttacaataatgaggctgcacttgggaatctgatt
gctgactctatgcgtaatgctgacttcggcgatggtgcaaaagctgccgatttcgccttt
atgaatccaggcggtatccgtgcggaccttccgaaaggtcctgtaaccttcggcgatctg
gctaaaattcagccattcggcaacacgcttgtgaagctgacactaaccggagcgcaaatc
aaaacattgctgcaacagcaatggaatgtaaaagctgatggaacaccagatatcaaaacg
ctgcaaatttccggactgaaatatacagcgaatatgtatctgccagtagctgatcgtatt
gcgagcctcacactaactgatggaacaccaattaatcctacgcagaaatatacagcagta
gtaaataactttatggctgcgggtggagataactacaaggttctgactcaagctagtgat
tcattggctggacctattgatttggacgtattctacgactacattgtaaaaacgtttaat
ggcaaagagattaaagcggccattgaaggacgtattattaataaattaaaggctgattcg
ggatcgggcaatggcagtggaggcggttctaccggtgtaactccaacgcctactccaacc
gcgaaaccaacagcaacagcaacaccagcaccatcaacagcaccaacggtaacacctgca
ccaactactgcgccagcagcaaacttcaaggatctgggtaaggtagcttgggcgcaagaa
gctattgaagcattggctgctaagggcattctgaaaggtctggatgcaaatacttttgcg
ccaaccaaaacagtgactagagcagagttcgttacgatgctggtacgcgcactgaatctt
acgggttcagcaacaaccagttcgttcaacgatgttaaacaaggagtttggtacacggat
tctatcgcccttgcggtgaaggctggacttgtacaaggctctggaaatggcaaatttgaa
ccgggtcgtgaagtgactcgtgaagaaatggccattatggttgctaacgcactgaaagac
aaactacagccgattgataaaaatgcagcattgggtaagtttgcagacaaatccagtatt
gctccttatgcacaagaggctatcgcacagctaactcaattgggaatcgtcaacggtgtt
gatggtgggaaatttgcacctaagggtatagctaatcgcgctcaagcagcggttatcatc
tatcgcatgcttggacaagtatcataa
DBGET
integrated database retrieval system