Paenibacillus odorifer: PODO_02580
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Entry
PODO_02580 CDS
T03326
Name
(GenBank) transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pod03000
]
PODO_02580
Transcription factors [BR:
pod03000
]
Prokaryotic type
Helix-turn-helix
Other families
PODO_02580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
MarR_2
HTH_11
HTH_24
HTH_IclR
HTH_Crp_2
GntR
Penicillinase_R
MarR
Fe_dep_repress
Rrf2
HTH_34
NirdL-like_HTH
HTH_5
HTH_AsnC-type
HTH_36
HTH_23
Sigma70_r4_2
HTH_28
PadR
DnaD_N
DUF5817_CT
z-alpha
Regulator_TrmB
HTH_10
HTH_29
HTH_22
HTH_8
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AIQ72249
UniProt:
A0A1R0YTQ8
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Position
578655..579473
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AA seq
272 aa
AA seq
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MEQLLLHLRNLGFTEMESKIMVELATKGQASGYEVAKQLGVSRSNVYAALQRLTQQGYVR
CGEGEPARYSVLNPEELATMISGRVQASLAYMESEMPRGGPVSPSFYNVEGDRNVMGALI
RQLNMAEQEIVVDMWREEASLLRSELEQAELRGVRLLWAFDGGNAAAASYPVWPSFGKDS
QRADGRKFSFVIDRSWCMLGMRYDDGSAQAVVTEHPVLVELLLNHFTQEMVLFELEQDMG
AELVERYGERYSKIHSKYVMYDQGDDGEEQAQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctgctgctgcatctgcgcaatctgggcttcacggagatggagtccaaaatc
atggtcgagcttgcgactaaaggtcaggcttctggctatgaggttgccaaacagctcgga
gtttcaagatcaaatgtgtatgcggcgcttcagcgcctaacacagcagggatatgtacga
tgtggtgaaggagagcctgcgcggtatagtgttctcaatccggaggagctggcgacgatg
atctcgggaagagttcaagcttcgctggcttatatggaaagtgagatgcctcgcgggggg
cctgttagtccttctttttataatgtagagggcgaccgcaatgtaatgggggcgctgatt
cgccagcttaacatggcagagcaggagattgtagtggatatgtggcgcgaggaagcgtcg
cttctgcggagcgaacttgaacaggccgaactgcgtggcgttaggcttttatgggctttt
gacggtggcaatgctgctgctgcctcttacccggtatggccgtcattcggaaaagattcg
cagcgggcggatggacggaagttctcatttgtgatcgaccggagctggtgtatgctgggg
atgcgttatgatgatggatccgcacaagcagtggtaacagagcacccggtgttagtggag
ctgttgttgaatcattttacacaggaaatggtcttattcgagctggagcaggatatgggc
gcagaattagtagagcgttatggagaacgttacagcaaaattcatagcaaatatgttatg
tatgatcaaggcgatgatggggaagaacaggcgcagtag
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