Paenibacillus odorifer: PODO_03025
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Entry
PODO_03025 CDS
T03326
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PODO_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_03025
Enzymes [BR:
pod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PODO_03025
DNA repair and recombination proteins [BR:
pod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PODO_03025
Prokaryotic type
PODO_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AIQ72329
LinkDB
All DBs
Position
673781..675025
Genome browser
AA seq
414 aa
AA seq
DB search
MQEAKQYFSYHLLEWYQGQKRDLPWRRHRNPYYIWISEIMLQQTRVDTVIPYFNRFIERF
PTVESLADAPEEDVLKCWEGLGYYSRARNIQHAAKQVKELYGGQVPNDREAVFSLKGVGP
YTAGAILSIAFNRPEPAVDGNVMRVLSRYFLIEDDIAKGPTRVKMEHLAAELIPEGEAAS
FNQALMELGALVCTPKSPRCLTCPVMEHCAARLAGCETSLPVKTKAKPPRPEERLAALIE
GRGAHAGQVLIRQRPQSGLLARMWELPHWPAPPVEGGAKGARLPEAAALDRLRRSLREAG
ISARPEKHWMAAEHIFSHIVWTLQVYRCSVEDALPLPIAAEGRGVYNAEADLFSGIDSSM
PIERFEDGNASPEDGGAVRWISREDMANYAFPNVFLKLLNLYFDEQEERAKLEK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggaggctaagcaatatttcagctatcatttgctggagtggtatcaagggcagaaa
cgggatttgccttggcgtcggcaccgcaatccttattatatttggatttccgaaataatg
ctgcagcagacaagggtggatacggtaatcccgtatttcaatcggtttatcgaaaggttt
cctaccgtggagtcgctcgccgatgcaccagaagaggacgtgcttaagtgctgggaaggc
ttaggttattattctcgtgctcgcaatatacagcatgcggccaagcaagtcaaagagctg
tatggcgggcaggtgccgaatgatcgcgaggctgtgttcagtttaaagggagtgggacct
tatacggcaggagctatccttagcattgcgttcaatcggccggagccagcggtcgacggc
aatgtgatgcgggtgttgtcccgatacttcctgatagaggatgatatcgccaagggaccc
acccgcgtaaaaatggagcacctggcagctgaactgatcccggagggagaagcggcatcc
tttaatcaggccctgatggagctcggggcgctcgtatgcactcctaagtcaccgcgctgt
ttaacctgcccggtgatggagcattgcgccgcgcgcctggcgggctgcgagacctcgctg
cccgtcaagaccaaggccaagccgccgcgccctgaggagcggctggcggccttaattgag
ggccgcggtgcccacgcgggccaagtgctcatccggcagcggccacaaagcgggctgtta
gcccgcatgtgggagctgccgcactggccagcgccgcctgtggaaggcggcgccaaaggc
gcgcggctgccggaagcagcggcgctggaccggctgcgccggtcactgcgggaggccggg
atctctgcccggcctgaaaagcactggatggctgctgagcatatcttcagccatatcgtg
tggacgctgcaggtgtaccgctgcagcgtagaggacgcccttccgctgccgatagcggca
gaaggacggggggtgtacaacgcggaagcggacttgttctcagggatcgacagcagcatg
cctatcgagagatttgaggacgggaacgctagtccagaggacggcggagcagtgcgctgg
atcagccgcgaagacatggctaactatgcgttccctaacgtttttctgaagctactgaac
ctttattttgatgagcaggaagagcgggcgaagctagagaagtag
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