Paenibacillus odorifer: PODO_04840
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Entry
PODO_04840 CDS
T03326
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_04840
Enzymes [BR:
pod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PODO_04840
Transfer RNA biogenesis [BR:
pod03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PODO_04840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AIQ72639
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All DBs
Position
1112227..1112829
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AA seq
200 aa
AA seq
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MNTKVSENESERLFLAVKLPSELQEIVAQACSKLAGNFEFAKWTNPQDYHITLQFLGDTP
KTVIPDLVKSLRQIAGQGSPFNLSLDKWDTFGLPASPRVLWIGVSGEIEALNQLAARVHS
ATFPLGFSGESRAYKPHLTVARKYRGKNSYDDKLLENLLKLDGDWNLKNYQRDWTIDSFV
LYATRMYAIPMYEIIEKFTV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaagtatcagagaacgaatcagaacggctttttctagctgtgaaattacct
tctgagctgcaagaaatagtggcgcaggcatgttcaaagctagctggaaattttgaattt
gctaaatggacaaatccgcaagattatcatattaccctgcaatttttaggagataccccc
aagaccgtaattccagatttagtaaaatcattaaggcagatcgcgggtcaaggcagcccc
ttcaatctctctttggacaaatgggacacatttggtcttccagcttccccaagagtcctg
tggataggggtttctggcgaaatagaggcattaaatcaattagctgcgagagtgcattct
gcgacgtttccattaggtttttcaggcgaatccagggcctataaaccgcatcttaccgtg
gctcgaaagtaccggggaaaaaattcatatgatgataaattgctggaaaacttactgaaa
ttggatggtgattggaacctaaaaaactatcagagagactggacgattgatagttttgtg
ttgtatgctaccagaatgtatgccattcctatgtatgaaattattgaaaagtttacagtt
taa
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