Paenibacillus odorifer: PODO_06660
Help
Entry
PODO_06660 CDS
T03326
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03030
DNA replication
pod03430
Mismatch repair
pod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PODO_06660
03430 Mismatch repair
PODO_06660
03440 Homologous recombination
PODO_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pod03032
]
PODO_06660
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_06660
Enzymes [BR:
pod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PODO_06660
DNA replication proteins [BR:
pod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PODO_06660
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PODO_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIQ72959
LinkDB
All DBs
Position
complement(1489976..1490632)
Genome browser
AA seq
218 aa
AA seq
DB search
MDFIAIDFETANSSRSSACALGLVEVKAGNITAEHSWLIDPQQRFDGMNISIHGITPSMV
IGQPTFQELWPTVEPLLHGQIVVAHNAAFDMSVLRYCLDGMSLSYPSFQYLCTYLLGKKM
LPDLPSHKLNVVSDFFGITLKHHDALDDARAAAAILVKLMEQEEHYDPLLLSASQGYTSG
TIFAGGYTPFSTRAKKPVKKQGTKHKPSIYSSRATLSK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggactttatagcaattgactttgagaccgcgaactccagtcgatccagcgcatgtgcc
ttgggacttgtggaagttaaagctggaaatataaccgcagagcattcttggctaattgac
ccgcagcagcggtttgatggcatgaacatttcgatacacggcatcacaccatcaatggta
atcggccaacctacttttcaagagctatggcccaccgttgaacctttactacacggacaa
atcgtcgtggcgcataatgctgcttttgatatgagcgtcctgcgttattgtctcgatgga
atgtccctgagctacccaagctttcaatacttatgtacctatttattaggcaaaaaaatg
ctgcccgacctgccctcccataaacttaatgtagtctccgattttttcggcattacgcta
aagcaccatgatgccttggatgacgcacgcgcagccgctgcaattctagtaaaacttatg
gagcaggaggagcactatgatcctctattgctctctgccagtcaaggatatactagcgga
acgatatttgccggtgggtataccccattttcgactcgcgcgaaaaagcctgttaagaaa
caaggcactaaacataaaccctccatttatagcagccgcgccactttgtcgaaataa
DBGET
integrated database retrieval system
