Paenibacillus odorifer: PODO_08245
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Entry
PODO_08245 CDS
T03326
Name
(GenBank) phenylalanyl-tRNA synthase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PODO_08245
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pod01007
]
PODO_08245
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_08245
Enzymes [BR:
pod01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
PODO_08245
Amino acid related enzymes [BR:
pod01007
]
Aminoacyl-tRNA synthetase
Class II (U)
PODO_08245
Transfer RNA biogenesis [BR:
pod03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PODO_08245
Prokaryotic type
PODO_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
SERTA
Motif
Other DBs
NCBI-ProteinID:
AIQ73244
UniProt:
A0A1R0WWH1
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All DBs
Position
1905190..1907634
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AA seq
814 aa
AA seq
DB search
MKVSTGWLADYTSIEGVTAEQLAEKITAAGIEIDGVERRNKGISGIVTGYVKSKEKHPDA
DKLNVCIVDAGQDEDLQIVCGAKNVAAGQTVPVALVGAKLPGLDIKKAKLRGVLSQGMIC
SAKELGLNDKLLPKEQQEGILVLPEGTEIGQDISKVLGLDDEILEFDLTPNRSDCLSMIG
AAYEVSAILGREVKLPDPKSEIIEISGPAADSISVKIEDEEYCSHYAVRYIAGVKPAPSP
LWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADKVQGGELGVRLAHEGEVLVTL
DGQERKLEPQMLVIADGVKAVGLAGVMGGRDTEVTAETVNLVLESAKFDGGTIRKTSRQL
GLRSEASLRFEKEVDPSAVIPALNRAAVLIARYAGGSVHEGIVQAGTDAVQEKVLTLSLE
KLNRYLGTDLSLLEVKTLFGRLHFKCGDTAQGLIEVQVPTRRGDISYDVDLIEEIARLYG
YDNIPTTLIEGITTPGALTHKQALRRELRRLLSHGGYQEVMGYSFIQPQQSTMFPALSEG
AVAVKLAMPMSEERSVLRTSLLPQLLDIASYNTNRRQSDLALFEIGNVFFTDEEQLTRQP
RELPVLGLLLSGSLTVKQWNVSAQPVDFFDLKGALETVFAHLGLTDKIVYVGDSPEGFHP
GRSASVYLLGNEGRVKIGTMGQIHPDLQRQLDLVDTYAAEILLQPLYESAQSRLQYNELP
RFPGMERDIAVVVDSAVPAGDLLASIRDNGGTLLQSVQVFDVYTGGKLESGKKSIAISLL
YRHSEHTLTDEEVGEVHEKVLASLQQTFGAELRK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatcaaccggatggttggctgattatacatcgattgaaggagtaaccgccgaa
cagctagcggagaagattaccgctgccggcattgagattgacggcgtagagcgccgcaat
aaaggcatttccggcatcgtaaccggctatgtgaaatcaaaggaaaaacatcctgatgcc
gacaagctgaacgtatgtatcgtggatgcgggccaagatgaggatctacaaatcgtctgc
ggcgcaaaaaatgtagctgcaggtcaaactgtacctgtagcactggtcggtgctaagctg
ccaggactggatatcaaaaaagccaagctgcgcggcgtcctatcgcaagggatgatctgc
tcggccaaagaattgggactgaatgataaattgcttccaaaagagcaacaagaaggtatt
cttgtgctgcctgaagggacagagattggtcaggatatttccaaggtcctcggcttagat
gacgagattctggaattcgatctgactccgaaccgttcggattgcctcagtatgattggt
gctgcttatgaagtaagtgcgattcttgggcgtgaagttaaattgcctgatccaaaaagc
gaaattattgagatcagtggtcctgctgcggattccatttccgtcaagattgaagatgaa
gaatactgcagccattatgcagttcgttatattgcaggtgttaaacctgcaccatcaccg
ctgtggattcagaatcgtctgatggctgctggggttcgtccaattaataatatcgtggac
attaccaattacgtgatgctggaatatggacagccgctgcatgcttttgatgcagataaa
gtgcaaggtggagaactcggcgttcgtcttgcccatgaaggtgaagttttggttacactt
gacggtcaagagcgtaagctagagccgcaaatgctcgttatcgctgatggagttaaagct
gtaggtctggccggagtaatgggtggacgggatacagaggttactgctgagacggtaaac
cttgttctggaatctgctaagtttgatggtggtacgattcgtaaaacctcgcgtcaattg
ggacttcgctctgaagcctcccttcgtttcgagaaggaagtggatccaagtgcagttatt
cctgcattgaaccgtgcagcagtgctgattgcacgttatgctggcggatcggtccatgaa
ggcatcgtgcaagcaggaactgacgctgttcaagagaaggttctcaccttgtccttagag
aaactgaatcgttatctgggaacggatttgtccttgctggaagtgaagacattgtttggc
cgtctacacttcaaatgcggagataccgcacaagggctgattgaagttcaagtcccaacc
agacgtggcgatatcagctatgatgttgatcttattgaagaaattgcccgcctgtacgga
tatgacaatattccaacgactctaattgaaggaattacaacgccaggagcactaactcac
aagcaagcgctccgtcgtgaactgcgccgcttattgtcacatggcggttaccaagaggtg
atgggttactccttcatccagccgcaacaaagcacaatgttccctgcgttatcagaagga
gcagtagcggtgaagctggctatgccgatgagtgaagaacgcagcgtactgcgtaccagc
cttcttccgcaactattggatattgccagctacaataccaatcgtcgtcaaagcgacttg
gcattgtttgaaatcggcaacgtcttcttcacggatgaagaacagctgactcgccaacca
cgcgaactgccagtgctggggctgttgcttagcggaagcttaacagtgaagcaatggaat
gtttcggcacagcctgtggacttctttgatttgaagggtgcgctggaaacggtatttgct
catttagggctgactgataaaatcgtctatgtgggagacagtccagaaggatttcatcct
gggcgttccgcatcggtatatttactcgggaacgagggccgtgtgaagatcggaacgatg
gggcagattcatccggatctgcaaagacagctggatctggtggatacttatgcggcagaa
attttattgcagccgttatatgaaagtgcgcaaagccgtttgcaatataatgagcttccg
cgtttcccgggaatggaacgggatattgctgtggtcgtggattccgctgtaccagcgggc
gatctgctggcttccatccgtgataacggaggtactttgctccagtccgtacaggtattt
gacgtgtacactggcggtaagctggagagtggaaagaagagcatcgcgatctcactgctg
tatcgtcatagtgaacatacactgactgatgaagaagtaggagaggtgcatgagaaggta
ttagcatctcttcaacaaacttttggtgcagaattaagaaagtag
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