KEGG   Paenibacillus odorifer: PODO_09510
Entry
PODO_09510        CDS       T03326                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pod  Paenibacillus odorifer
Pathway
pod03030  DNA replication
pod03410  Base excision repair
pod03420  Nucleotide excision repair
pod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PODO_09510
   03410 Base excision repair
    PODO_09510
   03420 Nucleotide excision repair
    PODO_09510
   03440 Homologous recombination
    PODO_09510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pod03032]
    PODO_09510
   03400 DNA repair and recombination proteins [BR:pod03400]
    PODO_09510
Enzymes [BR:pod01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PODO_09510
DNA replication proteins [BR:pod03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PODO_09510
DNA repair and recombination proteins [BR:pod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PODO_09510
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PODO_09510
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AIQ73471
UniProt: A0A1R0X2N2
LinkDB
Position
2196163..2198832
AA seq 889 aa
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHMIVAFDAG
KVTFRHEGYQDYKGGRQKTPPELSEQFPLLKELLTNLGVPQFEIGNYEADDIIGTISRQA
DEAGRQVMIVSGDKDMLQLASEHTTVALIRKGVTEVELYGPEQIREKYDLTPEQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLHQFGSVEGVLAGTGELKGKMKEKLETHAEDAVMSKK
LATIYREVPLEHSWEDMVFNGILADTAGPALAKLEFKSLLERLSLSAYAPVAEGEESAAE
VEAAALDITIVSEEELKGLSEALAGISALHVESNGDNPHRAEVIGIGLSSLERHYYVPFE
LLHKPAAAKLRDWLGDEKAPKSGYDLHRADLALHWQGIAFAGAAHDVQLAAYLLDPTEAN
QNLNDLTAKYGLPRLSPDEEVFGKGAKYKIPELEVLGNHVARKSATVLGIAQKQQQELVE
TAMTGLFEDLEMPLSRILADMEKQGIAVNAGDLKELGKEFEAQISKLVSEIYEICGTEFN
LNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDVVRLILQYRTIAKLQSTY
VEGLLKEISPNTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGW
SILAADYSQIELRVLAHISGDERMKEAFLHDMDIHTKTAMDVFGVTAEQVDSNMRRAAKA
VNFGIVYGISDYGLSQNLNIPRKEAAQFIEQYFEVYQGVRRYMDDIVVEARKYGYVTTLL
ERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALFDRGLKSRMLLQ
VHDELVFEVPEDEMELMKTLLPEVMGGALKLSVPLKAEVSFGSNWYEAK
NT seq 2670 nt   +upstreamnt  +downstreamnt
atggacaagttgatacttatagatggaaacaatattatttaccgtgctttttttgcgatg
cccccgctgacgaatacagcagggcaacagacaaatgcggtgtacggatttacaacgatg
ctgcttcgattaattgaagaacataaaccgacacatatgattgtcgctttcgatgcaggg
aaagttacttttcggcatgaaggttatcaggattataagggcggccggcaaaaaacaccg
cccgagctctccgagcagttcccattgctgaaggaattgctgactaatttaggtgtaccg
cagtttgaaattggcaattatgaggctgatgatattattggcaccatttcgcgccaggcg
gatgaagcgggacggcaggttatgatcgtgtcgggagacaaggatatgttgcagctggcc
tctgagcatacgaccgttgctttaatccgcaaaggggtcactgaagttgagctttatggg
ccggaacaaatccgggagaaatatgacctaaccccagagcagatcattgatcttaaaggg
ctgatgggcgatgcgagtgacaacatcccgggagtacccggcgtaggtgagaagacagct
ttgaagctgctgcatcaatttggatcggtggaaggtgtcttagctggaaccggtgagcta
aagggtaaaatgaaagaaaaactggaaacccatgcggaagatgcggtaatgagtaaaaaa
ttagcgaccatctatcgcgaagtgccgcttgagcattcgtgggaagacatggtctttaat
ggaattttagcggatacagccggcccagcgcttgccaagctggaatttaaatcactgttg
gaacgtttgtctcttagtgcttatgctcctgttgccgagggagaggaaagtgctgctgaa
gtagaagcagctgcacttgatattacgatcgtaagtgaagaagaacttaaggggctaagt
gaagccctggctggcatttcggcgctgcatgtggaatcgaatggagataatccgcatcgt
gccgaggtaatcggaataggattgtcctctctggagcggcattactatgtgccgtttgaa
ttactgcataaaccggctgctgcgaagctgcgtgattggctaggagatgaaaaggctccg
aaaagtggatatgatcttcaccgcgctgatttggctctacactggcagggaattgctttt
gcaggtgcagcccatgatgtgcagctggcggcttatttgcttgatcctacggaggctaat
cagaatctaaacgatctcactgctaaatacggcttgccgcggctctctcctgatgaagag
gtatttggtaaaggtgccaaatacaaaatccctgagcttgaagtcttaggaaatcacgtt
gcacgaaagagtgcaacggttcttggaatcgcacagaagcaacagcaggagctggtggag
accgcgatgacagggctattcgaggatctggaaatgcctttgtcacggattttggcggat
atggagaaacaggggattgcagtcaatgctggtgatcttaaagagcttggaaaagaattt
gaggcgcaaatttccaaattggtcagtgaaatatacgagatttgtggcactgagtttaat
ttgaactcaccaaagcagctgggtgaaatcttgtttgtaaagctaggtctgcctgtcgtc
aagaagacgaagacgggttattccacggatgccgaagtgcttgaaaaactggcgccatac
cacgatgtggtgcgtttgattttgcaatatcgcacaattgcgaagcttcaatctacctac
gtagaggggctgcttaaagaaatttccccgaacacagggaaggtgcatacattctaccgg
cagacgattgccgctacaggacggcttagcagccaattcccgaacttgcagaatatcccg
attcgtctagaggaaggacgcaaaatccgcaaggtattcgttccgtccgaaccgggctgg
tccatcctggcagccgactattcgcagatcgaactgcgtgtgctggcgcatatttcaggt
gatgagcggatgaaggaagcttttctgcatgatatggatattcacacgaagacagcgatg
gatgtgttcggtgtgaccgcggaacaggtggacagcaatatgcgccgtgccgcaaaagcc
gtaaacttcgggatcgtctacgggatcagtgattacggcctctcgcagaatttgaatatt
ccgcgtaaggaagccgctcaatttattgagcagtatttcgaggtatatcagggtgtgcgc
cgctatatggacgatatcgtagtagaggcgcgaaagtatggttatgtgaccacgttgctc
gaacgtcgccgttatctaccggagattaatgcgaagaactttaatctgcgctcttttgcg
gagcggacagcaatgaatacacctatacagggaacagcagcggatattatcaagctggcg
atggtgcatatggacaaggcattatttgatcgtgggcttaagagccgtatgctgcttcaa
gtacacgatgagcttgtattcgaggtgccagaggatgaaatggagcttatgaagacgctt
ttgccggaagtaatgggtggagcactgaagttatctgtgccacttaaggcagaggtcagc
tttggaagtaactggtacgaggcgaaatag

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