Paenibacillus odorifer: PODO_10400
Help
Entry
PODO_10400 CDS
T03326
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pod03009
]
PODO_10400
Enzymes [BR:
pod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PODO_10400
Ribosome biogenesis [BR:
pod03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PODO_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIQ73630
LinkDB
All DBs
Position
2394927..2395691
Genome browser
AA seq
254 aa
AA seq
DB search
MSLSGKTAKKQRLDKVLSHMGVGSRSDIRKQAKQGLITVNGAVVKDSGFHVDPYHDKIVV
GGELVTYREFIYLMMNKPPGVLSATEDKRDRTVLDLLKQEYVQFEPFPVGRLDKDTVGLL
LLTNDGKLAHELLSPRKHVPKTYEATVEGDVDADDVAAFAAGVELEDGYVTLPAQLTILG
RERGSKVISHISLIITEGKFHQVKRMFQAVGKKVTFLKRVSMGELRLDESLPLGASRELT
LEELALLSTEAPEQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcctatcagggaaaactgcaaaaaagcagcgtttagataaagtattgtcccatatg
ggggtaggatcacgcagcgatattcgtaaacaagccaagcaaggtttaattaccgtgaat
ggtgcagtcgtcaaggatagtggatttcatgtagacccttatcacgataaaattgtggtt
ggcggcgagcttgttacctatcgtgaatttatttatcttatgatgaataagccaccggga
gttctgtcggcaacagaggacaagcgggatcggactgttctggatcttttaaagcaggaa
tatgtacagtttgaaccttttcctgtaggaaggttagataaggacacagtagggctgctt
ctgctcaccaatgatggaaagcttgcccacgaactactatcgccacgcaagcatgtccct
aagacttatgaagctacagttgagggagacgtagatgcagacgatgtagcggcttttgcg
gcaggtgtcgagctggaagatggatatgttactttacctgcacagctaactatattggga
agagaacgtggcagtaaagtaatctcacatatttcgctgatcatcacagaaggaaagttt
caccaggtgaagcgaatgttccaagctgtcggcaaaaaagtcacttttctgaaacgagta
tctatgggagaattgaggctggacgaaagtctgccactgggagctagccgggaacttacg
ctagaggaactggcactcttaagtacagaagcaccagaacaataa
DBGET
integrated database retrieval system
