Paenibacillus odorifer: PODO_11825
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Entry
PODO_11825 CDS
T03326
Name
(GenBank) AraC family transcriptional regulator
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pod03000
]
PODO_11825
Transcription factors [BR:
pod03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PODO_11825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
AraC_binding
DUF374
HTH_3
PARG_cat_N
MPI_cupin_dom
Motif
Other DBs
NCBI-ProteinID:
AIQ73880
LinkDB
All DBs
Position
2715781..2717328
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AA seq
515 aa
AA seq
DB search
MINIEAQSLSVNGQTLVFQDHTLIIVSEGQGWLEAEKKRFPLEKGVGFLFEPGLISRINA
EERGLSFYRLTFEVIETGGSKQSGMEKGTREGILRSGPLSCRPFSQCALLLEAIYHSRRS
TEEIEWFAGHTRFQELLLLIMRANSSVIQMKGAHEAVQRSIRYMQEHYNHAITVDQLAEV
AGVTRARYTQIFKEVTGRIPLEHLNGLRIERAQQQLLLTNDRMHDIALSVGYSNEYYFNR
RFKRSVGVTPGQYRSFHQEGLRVFAPFLEDYLLALDITPVAQYSHAQWGKQEYLSLNDVP
AVDISTGDWQELSQYMPELILLDDGFQRWHLDECSQIAPLFKLPFHQEDWRATLFSAAAV
FGRTDRVQEVIGNYEHRAQQAKRVLNRSVQGQTVACLRISSYGINLYGCGQLGYTGSVLH
HDLGLQPHELVPKLTRGQKRVSLTREELASLTADHLFITFDRQEGEGRELLDTPLWRSLP
AVRSRCVYEVDFMAWMNYGVLSHQRKIEDVLRALG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgattaacatagaagcccaatccttatcggtgaacggacagaccttagtgtttcaagat
cataccctgatcattgtatcggaaggacagggatggttagaagccgagaagaagcgtttt
cccctggaaaaaggtgtcgggttcttgttcgaaccggggcttataagcagaatcaatgcc
gaggagcgaggacttagcttttataggcttacttttgaagtaatcgaaaccgggggaagt
aagcagagtggaatggaaaaggggactagagaaggaattctccggtctggtccgctaagc
tgcagacctttttcacaatgtgcactactgcttgaggctatctatcatagtcgcagaagt
acggaagagattgaatggttcgcaggccatacccgctttcaagagttactgctgctgatc
atgcgggcaaattcctctgtcatccagatgaaaggagcccatgaggcggtgcagcgttcc
atccgctatatgcaggaacattataatcacgccataaccgtcgatcaattggctgaagtg
gcaggcgttacacgtgcacgctacacacagatttttaaagaagtgacagggcggattccc
ttagagcatttgaacggacttcgtattgaaagggcccagcagcagttgctgcttacgaat
gaccgtatgcatgatatcgcgttatccgtaggatatagcaatgagtattattttaaccgg
cgtttcaaaagatcggtgggcgttacgcccggccaatacagaagcttccatcaggaaggg
ctgcgggtgttcgctccttttctggaagactatctgctggctctggatattacaccggtg
gcgcaatattctcatgctcagtgggggaagcaggagtatctgtccctcaacgatgtgcct
gcggttgatatttcaactggcgattggcaggagctctcccagtacatgcccgaactgatc
ctgctggatgatggctttcagcgttggcacctggatgagtgcagccaaattgctccgttg
ttcaagctgccttttcatcaggaggattggcgtgccacgttattttctgcagcagccgtc
tttggcagaacggaccgtgtccaggaagtgatcggcaattatgagcatcgggcgcagcaa
gctaaacgagtgctaaaccgttctgtccaagggcagactgtagcatgcttaagaatatct
tcctacggaatcaatctctatggatgcgggcaattgggttatacaggtagcgtactccat
catgatttaggtttgcagccccatgaattggttccgaagttgacccgtggacagaagcgg
gtgagcctaacaagagaagagcttgcgagcctgactgcagatcatttgttcattaccttt
gatcgacaggaaggagaaggacgggaactgctggatacaccgctttggcgcagtctgccc
gctgtgcgtagtcgctgtgtatatgaggtggattttatggcctggatgaattacggggta
ttgtcgcatcagcgcaagattgaagatgtgctaagagcgttagggtaa
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