Paenibacillus odorifer: PODO_12305
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Entry
PODO_12305 CDS
T03326
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00300
Lysine biosynthesis
pod00470
D-Amino acid metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01230
Biosynthesis of amino acids
Module
pod_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PODO_12305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PODO_12305
Enzymes [BR:
pod01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PODO_12305
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AIQ73963
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Position
2805454..2806290
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AA seq
278 aa
AA seq
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MEFTKMHGLGNDFIVVFGEQELPSNAAELAVTLCNRFFGIGADGLVYILPSERGDFKMRI
MNSDGSEAEQCGNAIRCVSKYVYDHGLVSSEQIVIETIGAGEQKVTLNVKDGVVETVTVD
MGEPVLSGLQIPVSIDAEPVLAQPIEADGTEFKFTAVSMGNPHCVIYVEDAVNFDLATWG
PKLEVHPLFPRKVNVEFATVLDRGRVDMRVWERGAGPTLACGTGACATLVSSVLNDLTDR
AAWISLKGGDLYIEWNEEDNHVYMTGPAEVVFTGSVAI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacaaaaatgcacggcctcggtaatgacttcatcgttgttttcggcgagcaa
gagctgccaagtaatgcagcggagcttgctgtaaccctatgcaaccggttctttggaatc
ggtgctgacggactggtatatatcctgccttctgagcgtggcgatttcaagatgcgtatt
atgaattctgatggttcggaggcggagcagtgcggaaatgccattcgctgtgtctctaaa
tatgtatatgaccacggactggtaagctcagagcagattgtaatagaaacgattggtgcc
ggagaacaaaaggttactttaaacgtgaaagacggtgttgtggagactgtaaccgtagat
atgggcgaacctgtattgtccggtctgcaaattccagtatctattgatgcagagccagtg
ctcgctcagccgattgaagcggacggaaccgaatttaagttcacagcggtatccatggga
aatcctcattgcgtgatttacgtagaagatgcagtgaattttgatcttgccacatgggga
cctaagcttgaggtacatcctttgttcccgagaaaagtaaacgttgaattcgcaacggta
ctggatcggggcagagtggatatgcgtgtctgggaacgtggggcaggacctacgcttgcc
tgtggcactggagcctgtgcaacccttgtctcctctgtactgaatgatcttacagaccgg
gcagcttggattagtctaaagggcggcgatctctatattgaatggaatgaagaggataat
catgtgtatatgactggacctgctgaggtcgtattcacgggcagtgtagcaatatag
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