Paenibacillus odorifer: PODO_12360
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Entry
PODO_12360 CDS
T03326
Name
(GenBank) primosomal protein DnaI
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PODO_12360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_12360
Enzymes [BR:
pod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PODO_12360
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PODO_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Helicase_C_2
Flavi_DEAD
Zn_ribbon_6
Cas3-like_C_2
PIF1
SLFN-g3_helicase
LexA_DNA_bind
DAP3
AAA_16
AAA_19
nSTAND_NTPase5
Zn_ribbon_ISL3
ATPase_2
SCP-1
FliG_M
Motif
Other DBs
NCBI-ProteinID:
AIQ73973
UniProt:
A0A1R0X164
LinkDB
All DBs
Position
2816246..2818777
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AA seq
843 aa
AA seq
DB search
MDIAKVIVDVPVRSTDRPFDYSIPESLKLWIEVGSRVAVPFGHRTVQGFVVSLESGETLV
SPSLKPIQEVLDLLPPLSPELVELADWMSKRYACRRISALQAMLPTALKGKAERLISLGD
VQEETAFPEDELFPMFADTGDEERLITEFIGRSGEVSMKQLTRAFPEAAETVKFMLRRGV
LIESQSIKDKMGKKKLKAVDLAIGVTAAREALNKFPKKSARQKEVLSFLVDMEATLPMAL
KEVLSALQVTASTVKALEEKGFIEISEIEVYRDPYQGRDFKPTTPLPLTAEQEVVYTRIS
RTLEEQLHEVFLLHGVTGSGKTEIYLQCIKRCLDQGRQAVVLVPEIALTPQMVERFKGRF
GSGVAVMHSRLSVGERYDEWRKIREGKATVAVGARSAVFAPFSNLGLIIMDEEHETSYKQ
EENPKYHARDAAIRRAEQCGAAVILGSATPSLESYHAARSQSDIHFSPVLLEMPTRALGN
ELPKVNVVDMREELKEGNRSMFSRKLHSALEERLERGEQTVLLLNRRGFSTFVMCRSCGY
VAGCPECDISLTYHSRSDNLRCHYCGHAEPAPKLCPECGSEHIRFFGTGTQRVEEELGKL
FPGIRVIRMDVDTTTEKGSHEKLLNQFRDKKADVLLGTQMVAKGLDFPDVTLVGVITADS
ALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVVVQSYTPEHYSIIHASGHDYLSFVREE
LKHRRGLHYPPYCRLILVTLSHEQLPLLLRMAENYALNLQGKARQLRWYGSLDKLTSDVL
DLLGPVASPIPRLKGRYRFQCMIKWRGAIDVIGLVRQVAEELEDSVRDTGLQISIDVDPQ
MLM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgccaaggtcattgtggatgtgcctgtacgcagcactgaccggccatttgat
tatagtattccagaatccctgaagttatggattgaagtgggcagtcgggtagccgttccg
tttgggcaccggacagtccaaggttttgtagtatctttagaatcaggcgagaccctagtg
agtcctagcctgaagcctattcaagaagtgttggatttgcttccgcctttatctcctgaa
ttagttgagcttgcggactggatgagtaaaagatatgcatgtagacgaatttcagcactg
caggcgatgttgcccaccgctctaaaagggaaggcagaacggctgatttcacttggagat
gtgcaggaagagacagcatttccagaggatgaattgttcccaatgtttgccgacacaggg
gatgaggaacgactaatcacagaatttattggacgtagtggcgaagtttccatgaagcag
cttactcgtgcatttcctgaggctgctgagacggtgaagttcatgctgcggcgtggagta
cttatagagagtcaatccattaaggataaaatgggtaagaaaaagctcaaggcagtcgat
ctggcgataggtgtcactgctgcccgtgaggcattgaacaaattcccgaaaaaatccgca
cgccagaaggaagttctgagctttttagttgatatggaagctacactccctatggccctt
aaagaagttttgtctgcactccaagtaacggcaagtactgtaaaggccttggaggaaaaa
ggttttatcgagatcagtgaaattgaagtctatcgcgatccttatcaaggacgagatttt
aaacctaccacacctctaccgcttacagcggaacaagaggtcgtatatacaagaatttct
cgaaccttagaggagcagcttcacgaagtatttctgcttcatggagttacgggtagtggt
aagacagagatctatttgcaatgtattaaacgctgtttagatcagggcagacaggctgtt
gttcttgtgccagagattgctttaacaccacaaatggtggagcggtttaaggggcggttc
ggcagcggggtcgcggttatgcatagccggctgtctgttggtgagcgatacgatgagtgg
cgtaaaatccgtgaaggaaaggccacagtcgctgtaggcgcaagatcggccgtgtttgct
cctttctccaacctagggttgattattatggatgaagaacatgagacctcttataaacag
gaggagaatccgaaatatcatgcccgtgatgctgctattcgtagagcagagcagtgtggg
gcagctgtgattcttggatctgccacgccttcgctggaaagctatcatgctgcaagatcg
cagagtgatattcatttttcaccggtactgctggagatgcctacccgtgcgcttggaaat
gaacttccaaaggtgaacgtagtagacatgcgggaagagcttaaagaaggcaaccgttcg
atgttcagccgaaagcttcattcagcactggaagagaggctggaacgcggagaacagacg
gtgctgctgcttaaccgtagaggtttctcaacctttgtcatgtgtcgtagctgtggttac
gtagccggttgtccagaatgtgatatctcactaacgtatcatagccgtagtgacaatttg
cgttgtcattattgcggacatgctgaaccagcacctaagctttgtccggagtgtggtagt
gagcatatccggtttttcggaacgggtacacagcgggtggaggaagagcttggtaagcta
ttcccaggcatacgagtgattcgtatggatgtggacacaacaacagaaaagggctcgcat
gagaagctgctgaaccaatttagagacaaaaaagcggatgttctcctgggcactcagatg
gtagcaaagggactggattttccagatgtcactcttgttggtgtaatcacagcagattca
gctttgaacctgcccgattttcgcgcagcagagaagacattccaattgcttacacaagtt
gcaggcagagcaggccggcaccagcttccaggcgaagtggtcgttcagtcctatacgcca
gagcattattctattattcatgccagcggacatgactatctctcttttgtacgtgaagag
ctgaagcatcgcagaggcctccattatccgccatattgcagactcatcctggtcacattg
tctcatgaacagctgccgcttctactgcggatggcagagaattatgctctgaatcttcag
ggaaaggccagacagctaaggtggtatggaagtctcgataagctaaccagcgatgtgtta
gatctgttgggtcctgtggcatcacctatccctcgattaaagggtagatatagattccag
tgtatgataaaatggcgcggcgccatcgatgtgattggacttgtccgccaagtggctgaa
gagttagaggattctgtgcgggataccggtcttcagatcagcattgatgtggatccgcag
atgttgatgtaa
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